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LOC100072389 IK cytokine [ Equus caballus (horse) ]

Gene ID: 100072389, updated on 22-Oct-2023

Summary

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Gene symbol
LOC100072389
Gene description
IK cytokine
See related
Ensembl:ENSECAG00000032142
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
IK
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Genomic context

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See LOC100072389 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) Unplaced Scaffold NW_019644119.1 (3412..15941, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 14 NC_009157.2 (36241155..36253663, complement)

NW_019644119.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like Neighboring gene transmembrane and coiled-coil domain-containing protein 6 Neighboring gene monocyte differentiation antigen CD14-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Red
Names
IK cytokine, down-regulator of HLA II

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NW_019644119.1 Reference EquCab3.0 Primary Assembly

    Range
    3412..15941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014730620.2 → XP_014586106.1  protein Red

    UniProtKB/TrEMBL
    A0A3Q2HWZ9, A0A3Q2L2B3
    Related
    ENSECAP00000077934.1, ENSECAT00000105069.1
    Conserved Domains (2) summary
    pfam07807
    Location:443 → 547
    RED_C; RED-like protein C-terminal region
    pfam07808
    Location:84 → 295
    RED_N; RED-like protein N-terminal region
Nucleotide Protein
Heading Accession and Version

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