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GTF3C2 general transcription factor IIIC subunit 2 [ Equus caballus (horse) ]

Gene ID: 100071210, updated on 8-Mar-2024

Summary

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Official Symbol
GTF3C2provided by VGNC
Official Full Name
general transcription factor IIIC subunit 2provided by VGNC
Primary source
VGNC:VGNC:18645
See related
Ensembl:ENSECAG00000014356
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
20
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (69914932..69940653)
102 previous assembly EquCab2.0 (GCF_000002305.2) 15 NC_009158.2 (68922069..68947315)

Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene zinc finger protein 513 Neighboring gene sorting nexin 17 Neighboring gene eukaryotic translation initiation factor 2B subunit delta Neighboring gene mitochondrial inner membrane protein MPV17 Neighboring gene urocortin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIIC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor 3C polypeptide 2
Names
general transcription factor IIIC, polypeptide 2, beta 110kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009158.3 Reference EquCab3.0 Primary Assembly

    Range
    69914932..69940653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023619327.1 → XP_023475095.1  general transcription factor 3C polypeptide 2 isoform X2

    UniProtKB/TrEMBL
    A0A9L0SXP0
    Conserved Domains (2) summary
    sd00039
    Location:558 → 595
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:559 → 644
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_003363025.4 → XP_003363073.1  general transcription factor 3C polypeptide 2 isoform X1

    See identical proteins and their annotated locations for XP_003363073.1

    UniProtKB/TrEMBL
    A0A9L0SKV1
    Conserved Domains (3) summary
    COG2319
    Location:558 → 723
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:558 → 595
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:559 → 644
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_005600122.3 → XP_005600179.1  general transcription factor 3C polypeptide 2 isoform X1

    See identical proteins and their annotated locations for XP_005600179.1

    UniProtKB/TrEMBL
    A0A9L0SKV1
    Related
    ENSECAP00000076694.1, ENSECAT00000087147.1
    Conserved Domains (3) summary
    COG2319
    Location:558 → 723
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:558 → 595
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:559 → 644
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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