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MDN1 midasin AAA ATPase 1 [ Equus caballus (horse) ]

Gene ID: 100071075, updated on 8-Mar-2024

Summary

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Official Symbol
MDN1provided by VGNC
Official Full Name
midasin AAA ATPase 1provided by VGNC
Primary source
VGNC:VGNC:20061
See related
Ensembl:ENSECAG00000008291
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
102
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (43032835..43192809, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 10 NC_009153.2 (42032704..42192000, complement)

Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene ankyrin repeat domain 6 Neighboring gene uncharacterized LOC106782228 Neighboring gene LYR motif containing 2 Neighboring gene caspase 8 associated protein 2 Neighboring gene gap junction protein alpha 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
midasin
Names
MDN1, midasin homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009153.3 Reference EquCab3.0 Primary Assembly

    Range
    43032835..43192809 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023650797.1 → XP_023506565.1  midasin isoform X2

    UniProtKB/TrEMBL
    A0A3Q2GWR1
    Conserved Domains (1) summary
    cl26761
    Location:206 → 2313
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

  2. XM_023650796.1 → XP_023506564.1  midasin isoform X1

    UniProtKB/TrEMBL
    A0A3Q2GWR1, F6XJW2
    Related
    ENSECAP00000007042.2, ENSECAT00000009278.3
    Conserved Domains (1) summary
    cl26761
    Location:206 → 2313
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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