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TTLL6 tubulin tyrosine ligase like 6 [ Equus caballus (horse) ]

Gene ID: 100069471, updated on 8-Mar-2024

Summary

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Official Symbol
TTLL6provided by VGNC
Official Full Name
tubulin tyrosine ligase like 6provided by VGNC
Primary source
VGNC:VGNC:24648
See related
Ensembl:ENSECAG00000014417
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See TTLL6 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (24843676..24886582, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 11 NC_009154.2 (24769660..24806026, complement)

Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene microRNA mir-196a Neighboring gene homeobox B13 Neighboring gene uncharacterized LOC106783329 Neighboring gene calcium binding and coiled-coil domain 2 Neighboring gene ATP synthase membrane subunit c locus 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin-glutamic acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin polyglutamylase TTLL6
Names
tubulin tyrosine ligase-like family, member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009154.3 Reference EquCab3.0 Primary Assembly

    Range
    24843676..24886582 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023652683.1 → XP_023508451.1  tubulin polyglutamylase TTLL6 isoform X1

    Conserved Domains (1) summary
    pfam03133
    Location:4 → 279
    TTL; Tubulin-tyrosine ligase family

  2. XM_023652684.1 → XP_023508452.1  tubulin polyglutamylase TTLL6 isoform X1

    Conserved Domains (1) summary
    pfam03133
    Location:4 → 279
    TTL; Tubulin-tyrosine ligase family

  3. XM_023652682.1 → XP_023508450.1  tubulin polyglutamylase TTLL6 isoform X1

    Conserved Domains (1) summary
    pfam03133
    Location:4 → 279
    TTL; Tubulin-tyrosine ligase family

  4. XM_023652681.1 → XP_023508449.1  tubulin polyglutamylase TTLL6 isoform X1

    Conserved Domains (1) summary
    pfam03133
    Location:4 → 279
    TTL; Tubulin-tyrosine ligase family

  5. XM_014740981.2 → XP_014596467.1  tubulin polyglutamylase TTLL6 isoform X2

    Conserved Domains (1) summary
    pfam03133
    Location:4 → 279
    TTL; Tubulin-tyrosine ligase family

  6. XM_023652685.1 → XP_023508453.1  tubulin polyglutamylase TTLL6 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2GRT2
    Related
    ENSECAP00000023174.3, ENSECAT00000045434.3
    Conserved Domains (1) summary
    cl17255
    Location:2 → 162
    CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain
Nucleotide Protein
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