U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TMA16 translation machinery associated 16 homolog [ Equus caballus (horse) ]

Gene ID: 100068458, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
TMA16provided by VGNC
Official Full Name
translation machinery associated 16 homologprovided by VGNC
Primary source
VGNC:VGNC:111068
See related
Ensembl:ENSECAG00000015062
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (71452980..71510846, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 2 NC_009145.2 (70998773..71031960, complement)

Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene tripartite motif-containing protein 60-like Neighboring gene apelin receptor early endogenous ligand Neighboring gene membrane associated ring-CH-type finger 1 Neighboring gene transketolase like 2 Neighboring gene neuropeptide Y receptor Y5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
translation machinery-associated protein 16

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009145.3 Reference EquCab3.0 Primary Assembly

    Range
    71452980..71510846 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023636356.1 → XP_023492124.1  translation machinery-associated protein 16 isoform X2

    Conserved Domains (1) summary
    pfam11176
    Location:13 → 144
    Tma16; Translation machinery-associated protein 16

  2. XM_005607747.3 → XP_005607804.1  translation machinery-associated protein 16 isoform X1

    See identical proteins and their annotated locations for XP_005607804.1

    UniProtKB/TrEMBL
    A0A9L0R347, F7BZM7
    Related
    ENSECAP00000057280.1, ENSECAT00000095116.1
    Conserved Domains (1) summary
    pfam11176
    Location:13 → 161
    DUF2962; Protein of unknown function (DUF2962)

  3. XM_023636357.1 → XP_023492125.1  translation machinery-associated protein 16 isoform X3

    Related
    ENSECAP00000082816.1, ENSECAT00000126191.1
    Conserved Domains (1) summary
    pfam11176
    Location:13 → 138
    Tma16; Translation machinery-associated protein 16

RNA

  1. XR_289907.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous