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GGCX gamma-glutamyl carboxylase [ Equus caballus (horse) ]

Gene ID: 100067312, updated on 8-Mar-2024

Summary

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Official Symbol
GGCXprovided by VGNC
Official Full Name
gamma-glutamyl carboxylaseprovided by VGNC
Primary source
VGNC:VGNC:18324
See related
Ensembl:ENSECAG00000010458
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
17
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (19595743..19606421)
102 previous assembly EquCab2.0 (GCF_000002305.2) 15 NC_009158.2 (18915695..18926316)

Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene vesicle associated membrane protein 5 Neighboring gene vesicle associated membrane protein 8 Neighboring gene methionine adenosyltransferase 2A Neighboring gene 60S ribosomal protein L34 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-glutamyl carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables vitamin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-glutamic acid carboxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vitamin K-dependent gamma-carboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009158.3 Reference EquCab3.0 Primary Assembly

    Range
    19595743..19606421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001498891.6 → XP_001498941.2  vitamin K-dependent gamma-carboxylase isoform X1

    UniProtKB/TrEMBL
    F7DQ43
    Related
    ENSECAP00000039038.2, ENSECAT00000051029.3
    Conserved Domains (2) summary
    smart00752
    Location:56 → 315
    HTTM; Horizontally Transferred TransMembrane Domain
    pfam05090
    Location:66 → 502
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase

  2. XM_023618788.1 → XP_023474556.1  vitamin K-dependent gamma-carboxylase isoform X4

    Conserved Domains (1) summary
    pfam05090
    Location:66 → 431
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase

  3. XM_023618789.1 → XP_023474557.1  vitamin K-dependent gamma-carboxylase isoform X5

    Conserved Domains (1) summary
    pfam05090
    Location:66 → 183
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase

  4. XM_023618790.1 → XP_023474558.1  vitamin K-dependent gamma-carboxylase isoform X6

    Conserved Domains (1) summary
    pfam05090
    Location:66 → 125
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase

  5. XM_005599862.3 → XP_005599919.1  vitamin K-dependent gamma-carboxylase isoform X2

    UniProtKB/TrEMBL
    F7DQ43
    Related
    ENSECAP00000008762.3, ENSECAT00000011237.3
    Conserved Domains (2) summary
    smart00752
    Location:23 → 282
    HTTM; Horizontally Transferred TransMembrane Domain
    pfam05090
    Location:33 → 469
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase

  6. XM_023618787.1 → XP_023474555.1  vitamin K-dependent gamma-carboxylase isoform X3

    UniProtKB/TrEMBL
    A0A3Q2LEL2
    Conserved Domains (1) summary
    pfam05090
    Location:1 → 374
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
Nucleotide Protein
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