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MRPL39 mitochondrial ribosomal protein L39 [ Equus caballus (horse) ]

Gene ID: 100066408, updated on 8-Mar-2024

Summary

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Official Symbol
MRPL39provided by VGNC
Official Full Name
mitochondrial ribosomal protein L39provided by VGNC
Primary source
VGNC:VGNC:58192
See related
Ensembl:ENSECAG00000014964
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See MRPL39 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
12
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 26 NC_009169.3 (23987082..24006564, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 26 NC_009169.2 (23263541..23283142, complement)

Chromosome 26 - NC_009169.3Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene microRNA mir-155 Neighboring gene junctional adhesion molecule 2 Neighboring gene ATP synthase peripheral stalk subunit F6 Neighboring gene GA binding protein transcription factor subunit alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
39S ribosomal protein L39, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009169.3 Reference EquCab3.0 Primary Assembly

    Range
    23987082..24006564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023629962.1 → XP_023485730.1  39S ribosomal protein L39, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A9L0R7A2, A0A9L0RKM9
    Related
    ENSECAP00000057626.1, ENSECAT00000139477.1
    Conserved Domains (1) summary
    cl28417
    Location:27 → 300
    ThrS; Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]

  2. XM_001496687.6 → XP_001496737.5  39S ribosomal protein L39, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A9L0RKM9
    Related
    ENSECAP00000038063.1, ENSECAT00000050127.2
    Conserved Domains (1) summary
    cl28417
    Location:27 → 300
    ThrS; Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]

  3. XM_023629963.1 → XP_023485731.1  39S ribosomal protein L39, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A9L0R8J5, A0A9L0RKM9
    Related
    ENSECAP00000060342.1, ENSECAT00000088494.1
    Conserved Domains (1) summary
    cl28417
    Location:27 → 300
    ThrS; Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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