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EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 [ Equus caballus (horse) ]

Gene ID: 100058294, updated on 8-Mar-2024

Summary

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Official Symbol
EIF4ENIF1provided by VGNC
Official Full Name
eukaryotic translation initiation factor 4E nuclear import factor 1provided by VGNC
Primary source
VGNC:VGNC:17506
See related
Ensembl:ENSECAG00000000311
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
21
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 8 NC_009151.3 (7729001..7773348)
102 previous assembly EquCab2.0 (GCF_000002305.2) 8 NC_009151.2 (5616355..5660230)

Chromosome 8 - NC_009151.3Genomic Context describing neighboring genes Neighboring gene phosphatidylserine decarboxylase Neighboring gene SFI1 centrin binding protein Neighboring gene developmentally regulated GTP binding protein 1 Neighboring gene POZ/BTB and AT hook containing zinc finger 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 4E transporter
Names
Eukaryotic translation initiation factor 4E transporter-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001301265.2 → NP_001288194.1  eukaryotic translation initiation factor 4E transporter

    See identical proteins and their annotated locations for NP_001288194.1

    Status: PROVISIONAL

    Source sequence(s)
    PJAA01000009
    UniProtKB/TrEMBL
    A0A9L0TKB0
    Related
    ENSECAP00000087480.1, ENSECAT00000135551.1
    Conserved Domains (1) summary
    pfam10477
    Location:30 → 711
    EIF4E-T; Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E

RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009151.3 Reference EquCab3.0 Primary Assembly

    Range
    7729001..7773348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023646591.1 → XP_023502359.1  eukaryotic translation initiation factor 4E transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H0T8, A0A9L0TKB0
    Conserved Domains (1) summary
    pfam10477
    Location:30 → 712
    EIF4E-T; Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E

  2. XM_023646590.1 → XP_023502358.1  eukaryotic translation initiation factor 4E transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H0T8, A0A9L0TKB0
    Conserved Domains (1) summary
    pfam10477
    Location:30 → 712
    EIF4E-T; Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E

  3. XM_005612420.3 → XP_005612477.1  eukaryotic translation initiation factor 4E transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H0T8, A0A9L0TKB0
    Related
    ENSECAP00000027024.2, ENSECAT00000063553.2
    Conserved Domains (1) summary
    pfam10477
    Location:30 → 712
    EIF4E-T; Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E

  4. XM_001496800.6 → XP_001496850.2  eukaryotic translation initiation factor 4E transporter isoform X2

    See identical proteins and their annotated locations for XP_001496850.2

    UniProtKB/TrEMBL
    A0A9L0TKB0
    Conserved Domains (1) summary
    pfam10477
    Location:30 → 711
    EIF4E-T; Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E

  5. XM_005612421.3 → XP_005612478.1  eukaryotic translation initiation factor 4E transporter isoform X3

    UniProtKB/TrEMBL
    A0A9L0TKB0, F7DND1
    Related
    ENSECAP00000000582.3, ENSECAT00000000734.4
    Conserved Domains (1) summary
    pfam10477
    Location:30 → 688
    EIF4E-T; Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E

  6. XM_023646592.1 → XP_023502360.1  eukaryotic translation initiation factor 4E transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H0T8, A0A9L0TKB0
    Conserved Domains (1) summary
    pfam10477
    Location:30 → 712
    EIF4E-T; Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E
Nucleotide Protein
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