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ZMAT3 zinc finger matrin-type 3 [ Equus caballus (horse) ]

Gene ID: 100058096, updated on 8-Mar-2024

Summary

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Official Symbol
ZMAT3provided by VGNC
Official Full Name
zinc finger matrin-type 3provided by VGNC
Primary source
VGNC:VGNC:25243
See related
Ensembl:ENSECAG00000012784
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ZMAT3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 19 NC_009162.3 (20567435..20598840, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 19 NC_009162.2 (18191739..18223212, complement)

Chromosome 19 - NC_009162.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111769026 Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 2 Neighboring gene U6 spliceosomal RNA Neighboring gene phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger matrin-type protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009162.3 Reference EquCab3.0 Primary Assembly

    Range
    20567435..20598840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001494925.5 → XP_001494975.1  zinc finger matrin-type protein 3

    See identical proteins and their annotated locations for XP_001494975.1

    UniProtKB/TrEMBL
    A0A3Q2HC49, A0A9L0S2L6
    Conserved Domains (2) summary
    smart00451
    Location:67 → 101
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:72 → 94
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_005601818.3 → XP_005601875.1  zinc finger matrin-type protein 3

    See identical proteins and their annotated locations for XP_005601875.1

    UniProtKB/TrEMBL
    A0A3Q2HC49, A0A9L0S2L6
    Conserved Domains (2) summary
    smart00451
    Location:67 → 101
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:72 → 94
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_023623331.1 → XP_023479099.1  zinc finger matrin-type protein 3

    UniProtKB/TrEMBL
    A0A3Q2HC49, A0A9L0S2L6
    Related
    ENSECAP00000031676.3, ENSECAT00000057876.3
    Conserved Domains (2) summary
    smart00451
    Location:67 → 101
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:72 → 94
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_023623332.1 → XP_023479100.1  zinc finger matrin-type protein 3

    UniProtKB/TrEMBL
    A0A3Q2HC49, A0A9L0S2L6
    Conserved Domains (2) summary
    smart00451
    Location:67 → 101
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:72 → 94
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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