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SLC12A6 solute carrier family 12 member 6 [ Equus caballus (horse) ]

Gene ID: 100058046, updated on 8-Mar-2024

Summary

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Official Symbol
SLC12A6provided by VGNC
Official Full Name
solute carrier family 12 member 6provided by VGNC
Primary source
VGNC:VGNC:23022
See related
Ensembl:ENSECAG00000025068
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
28
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (156242879..156325122, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 1 NC_009144.2 (154576831..154658062, complement)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene ER membrane protein complex subunit 7 Neighboring gene katanin regulatory subunit B1 like 1 Neighboring gene ER membrane protein complex subunit 4 Neighboring gene NOP10 ribonucleoprotein Neighboring gene NUT midline carcinoma family member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables potassium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell volume homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 12 member 6
Names
solute carrier family 12 (potassium/chloride transporters), member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    156242879..156325122 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001918315.5 → XP_001918350.3  solute carrier family 12 member 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H3T0, F6Q5D6
    Related
    ENSECAP00000022671.2, ENSECAT00000027100.3
    Conserved Domains (1) summary
    TIGR00930
    Location:109 → 1150
    2a30; K-Cl cotransporter

  2. XM_023620699.1 → XP_023476467.1  solute carrier family 12 member 6 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2H131, A0A3Q2H3T0
    Related
    ENSECAP00000026620.2, ENSECAT00000033450.2
    Conserved Domains (1) summary
    TIGR00930
    Location:94 → 1135
    2a30; K-Cl cotransporter

  3. XM_023620704.1 → XP_023476472.1  solute carrier family 12 member 6 isoform X4

    UniProtKB/TrEMBL
    A0A5F5PFH4
    Related
    ENSECAP00000028295.1, ENSECAT00000038912.3
    Conserved Domains (1) summary
    TIGR00930
    Location:1 → 1011
    2a30; K-Cl cotransporter

  4. XM_023620702.1 → XP_023476470.1  solute carrier family 12 member 6 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2H3T0, A0A3Q2LA10
    Related
    ENSECAP00000036327.2, ENSECAT00000043740.3
    Conserved Domains (1) summary
    TIGR00930
    Location:60 → 1101
    2a30; K-Cl cotransporter

  5. XM_023620709.1 → XP_023476477.1  solute carrier family 12 member 6 isoform X4

    UniProtKB/TrEMBL
    A0A5F5PFH4
    Conserved Domains (1) summary
    TIGR00930
    Location:1 → 1011
    2a30; K-Cl cotransporter
Nucleotide Protein
Heading Accession and Version

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