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NCOA6 nuclear receptor coactivator 6 [ Equus caballus (horse) ]

Gene ID: 100054476, updated on 8-Mar-2024

Summary

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Official Symbol
NCOA6provided by VGNC
Official Full Name
nuclear receptor coactivator 6provided by VGNC
Primary source
VGNC:VGNC:20600
See related
Ensembl:ENSECAG00000011243
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
17
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 22 NC_009165.3 (26473499..26576385, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 22 NC_009165.2 (25574320..25660136, complement)

Chromosome 22 - NC_009165.3Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis class U Neighboring gene uncharacterized LOC111769996 Neighboring gene tumor protein p53 inducible nuclear protein 2 Neighboring gene gamma-glutamyltransferase 7 Neighboring gene 40S ribosomal protein S9 pseudogene Neighboring gene acyl-CoA synthetase short chain family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor coactivator 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009165.3 Reference EquCab3.0 Primary Assembly

    Range
    26473499..26576385 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023626398.1 → XP_023482166.1  nuclear receptor coactivator 6 isoform X1

    UniProtKB/TrEMBL
    F7AFA7
    Related
    ENSECAP00000009270.3, ENSECAT00000011813.4
    Conserved Domains (3) summary
    pfam09606
    Location:461 → 858
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam13820
    Location:48 → 190
    Nucleic_acid_bd; Putative nucleic acid-binding region
    cl26464
    Location:151 → 540
    Atrophin-1; Atrophin-1 family

  2. XM_023626403.1 → XP_023482171.1  nuclear receptor coactivator 6 isoform X5

    UniProtKB/TrEMBL
    F7AFA7
    Conserved Domains (3) summary
    pfam09606
    Location:250 → 699
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam13820
    Location:48 → 190
    Nucleic_acid_bd; Putative nucleic acid-binding region
    cl26464
    Location:955 → 1176
    Atrophin-1; Atrophin-1 family

  3. XM_023626402.1 → XP_023482170.1  nuclear receptor coactivator 6 isoform X4

    UniProtKB/TrEMBL
    F7AFA7
    Conserved Domains (3) summary
    pfam09606
    Location:508 → 824
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam13820
    Location:48 → 190
    Nucleic_acid_bd; Putative nucleic acid-binding region
    cl26464
    Location:1043 → 1264
    Atrophin-1; Atrophin-1 family

  4. XM_023626401.1 → XP_023482169.1  nuclear receptor coactivator 6 isoform X3

    UniProtKB/TrEMBL
    F7AFA7
    Conserved Domains (3) summary
    pfam09606
    Location:303 → 733
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam13820
    Location:48 → 190
    Nucleic_acid_bd; Putative nucleic acid-binding region
    cl26464
    Location:1044 → 1265
    Atrophin-1; Atrophin-1 family

  5. XM_023626404.1 → XP_023482172.1  nuclear receptor coactivator 6 isoform X6

    Conserved Domains (2) summary
    pfam09606
    Location:377 → 799
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam13820
    Location:48 → 190
    Nucleic_acid_bd; Putative nucleic acid-binding region

  6. XM_023626400.1 → XP_023482168.1  nuclear receptor coactivator 6 isoform X2

    UniProtKB/TrEMBL
    F7AFA7
    Conserved Domains (3) summary
    pfam09606
    Location:461 → 858
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam13820
    Location:48 → 190
    Nucleic_acid_bd; Putative nucleic acid-binding region
    cl26464
    Location:151 → 540
    Atrophin-1; Atrophin-1 family

  7. XM_023626395.1 → XP_023482163.1  nuclear receptor coactivator 6 isoform X1

    UniProtKB/TrEMBL
    F7AFA7
    Conserved Domains (3) summary
    pfam09606
    Location:461 → 858
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam13820
    Location:48 → 190
    Nucleic_acid_bd; Putative nucleic acid-binding region
    cl26464
    Location:151 → 540
    Atrophin-1; Atrophin-1 family

  8. XM_023626397.1 → XP_023482165.1  nuclear receptor coactivator 6 isoform X1

    UniProtKB/TrEMBL
    F7AFA7
    Conserved Domains (3) summary
    pfam09606
    Location:461 → 858
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam13820
    Location:48 → 190
    Nucleic_acid_bd; Putative nucleic acid-binding region
    cl26464
    Location:151 → 540
    Atrophin-1; Atrophin-1 family

  9. XM_023626399.1 → XP_023482167.1  nuclear receptor coactivator 6 isoform X1

    UniProtKB/TrEMBL
    F7AFA7
    Conserved Domains (3) summary
    pfam09606
    Location:461 → 858
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam13820
    Location:48 → 190
    Nucleic_acid_bd; Putative nucleic acid-binding region
    cl26464
    Location:151 → 540
    Atrophin-1; Atrophin-1 family

  10. XM_023626396.1 → XP_023482164.1  nuclear receptor coactivator 6 isoform X1

    UniProtKB/TrEMBL
    F7AFA7
    Conserved Domains (3) summary
    pfam09606
    Location:461 → 858
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam13820
    Location:48 → 190
    Nucleic_acid_bd; Putative nucleic acid-binding region
    cl26464
    Location:151 → 540
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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