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GPR39 G protein-coupled receptor 39 [ Equus caballus (horse) ]

Gene ID: 100054142, updated on 8-Mar-2024

Summary

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Gene symbol
GPR39
Gene description
G protein-coupled receptor 39
See related
Ensembl:ENSECAG00000005577
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
2
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 18 NC_009161.3 (16714004..16904012)
102 previous assembly EquCab2.0 (GCF_000002305.2) 18 NC_009161.2 (16646858..16836329)

Chromosome 18 - NC_009161.3Genomic Context describing neighboring genes Neighboring gene actin related protein 3 Neighboring gene solute carrier family 35 member F5 Neighboring gene LY6/PLAUR domain containing 1 Neighboring gene NCK associated protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G-protein coupled receptor 39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009161.3 Reference EquCab3.0 Primary Assembly

    Range
    16714004..16904012
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001488974.5 → XP_001489024.2  G-protein coupled receptor 39

    UniProtKB/TrEMBL
    A0A9L0TA06, F6SK25
    Related
    ENSECAP00000083918.1, ENSECAT00000103815.1
    Conserved Domains (1) summary
    pfam00001
    Location:47 → 344
    7tm_1; 7 transmembrane receptor (rhodopsin family)
Nucleotide Protein
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