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LGALS8 galectin 8 [ Equus caballus (horse) ]

Gene ID: 100050491, updated on 8-Mar-2024

Summary

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Official Symbol
LGALS8provided by VGNC
Official Full Name
galectin 8provided by VGNC
Primary source
VGNC:VGNC:19644
See related
Ensembl:ENSECAG00000015230
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (76006768..76034637, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 1 NC_009144.2 (75029679..75049803, complement)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111774624 Neighboring gene actinin alpha 2 Neighboring gene HEAT repeat containing 1 Neighboring gene uncharacterized LOC102148322 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC111774630 Neighboring gene EDAR associated death domain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-8
Names
Galectin-8-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001309335.2 → NP_001296264.1  galectin-8

    Status: PROVISIONAL

    Source sequence(s)
    PJAA01000002
    UniProtKB/TrEMBL
    A0A3Q2H2R5
    Related
    ENSECAP00000027879.2, ENSECAT00000055658.2
    Conserved Domains (1) summary
    smart00908
    Location:23 → 148
    Gal-bind_lectin; Galactoside-binding lectin

RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    76006768..76034637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023630577.1 → XP_023486345.1  galectin-8 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H2R5, A0A3Q2I4U6
    Conserved Domains (1) summary
    smart00908
    Location:23 → 148
    Gal-bind_lectin; Galactoside-binding lectin

  2. XM_023631664.1 → XP_023487432.1  galectin-8 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H2R5, A0A3Q2I4U6
    Conserved Domains (1) summary
    smart00908
    Location:23 → 148
    Gal-bind_lectin; Galactoside-binding lectin

  3. XM_005602660.3 → XP_005602717.1  galectin-8 isoform X1

    See identical proteins and their annotated locations for XP_005602717.1

    UniProtKB/TrEMBL
    A0A3Q2H2R5, A0A3Q2I4U6
    Related
    ENSECAP00000040655.2, ENSECAT00000056680.2
    Conserved Domains (1) summary
    smart00908
    Location:23 → 148
    Gal-bind_lectin; Galactoside-binding lectin

  4. XM_005602662.3 → XP_005602719.1  galectin-8 isoform X2

    See identical proteins and their annotated locations for XP_005602719.1

    UniProtKB/TrEMBL
    A0A3Q2HVW3, A0A3Q2L9D8, A0A9R1SI39, K9KC84
    Related
    ENSECAP00000038508.2, ENSECAT00000044871.3
    Conserved Domains (1) summary
    smart00908
    Location:23 → 148
    Gal-bind_lectin; Galactoside-binding lectin

  5. XM_005602661.3 → XP_005602718.1  galectin-8 isoform X1

    See identical proteins and their annotated locations for XP_005602718.1

    UniProtKB/TrEMBL
    A0A3Q2H2R5, A0A3Q2I4U6
    Conserved Domains (1) summary
    smart00908
    Location:23 → 148
    Gal-bind_lectin; Galactoside-binding lectin
Nucleotide Protein
Heading Accession and Version

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