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Gm16404 predicted gene 16404 [ Mus musculus (house mouse) ]

Gene ID: 100039055, updated on 8-Feb-2024

Summary

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Official Symbol
Gm16404provided by MGI
Official Full Name
predicted gene 16404provided by MGI
Primary source
MGI:MGI:3647157
See related
AllianceGenome:MGI:3647157
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG625711
Expression
Restricted expression toward testis adult (RPKM 7.5) See more
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Genomic context

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Location:
X A5; X 30.06 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (54596956..54613817)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (55551596..55568457)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene 6660 Neighboring gene STARR-seq mESC enhancer starr_47198 Neighboring gene predicted gene 14625 Neighboring gene STARR-seq mESC enhancer starr_47199 Neighboring gene STARR-seq mESC enhancer starr_47200 Neighboring gene STARR-seq mESC enhancer starr_47201 Neighboring gene STARR-seq mESC enhancer starr_47202 Neighboring gene predicted gene 14622 Neighboring gene predicted gene 6664

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Clone Names

  • MGC198646

General protein information

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Preferred Names
Slx-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001220497.1 → NP_001207426.1  Slx-like

    See identical proteins and their annotated locations for NP_001207426.1

    Status: VALIDATED

    Source sequence(s)
    BC171941
    UniProtKB/TrEMBL
    B7ZN82

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    54596956..54613817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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