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stil STIL, centriolar assembly protein [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100036624, updated on 8-Mar-2024

Summary

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Official Symbol
stilprovided by Xenbase
Official Full Name
STIL, centriolar assembly proteinprovided by Xenbase
Primary source
Xenbase:XB-GENE-975750
See related
Ensembl:ENSXETG00000016343
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
MCPH7
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (93963488..93985033, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (83757579..83778636, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene pdzk1 interacting protein 1 Neighboring gene T-cell acute lymphocytic leukemia 1 Neighboring gene cytidine monophosphate (UMP-CMP) kinase 1, cytosolic Neighboring gene forkhead box E3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
SCL-interrupting locus protein
Names
SCL/TAL1 interrupting locus

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097183.1 → NP_001090652.1  SCL-interrupting locus protein

    See identical proteins and their annotated locations for NP_001090652.1

    Status: PROVISIONAL

    Source sequence(s)
    BC127283
    UniProtKB/TrEMBL
    A0A803KFY0, A0JP78, F6PKD2
    Related
    ENSXETP00000035676.5, ENSXETT00000035676.5
    Conserved Domains (1) summary
    pfam15253
    Location:46 → 443
    STIL_N; SCL-interrupting locus protein N-terminus

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    93963488..93985033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031899696.1 → XP_031755556.1  SCL-interrupting locus protein isoform X1

    UniProtKB/TrEMBL
    A0A803KFY0, A0A8J1JFY1
    Related
    ENSXETP00000105019.1, ENSXETT00000108234.1
    Conserved Domains (1) summary
    pfam15253
    Location:17 → 414
    STIL_N; SCL-interrupting locus protein N-terminus
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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