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SREBF1 sterol regulatory element binding transcription factor 1 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100029730, updated on 8-Mar-2024

Summary

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Gene symbol
SREBF1
Gene description
sterol regulatory element binding transcription factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 7 NC_077233.1 (279729787..279799857, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 6 NC_008806.1 (12853567..12924643)

Chromosome 7 - NC_077233.1Genomic Context describing neighboring genes Neighboring gene ras related dexamethasone induced 1 Neighboring gene phosphatidylethanolamine N-methyltransferase Neighboring gene retinoic acid induced 1 Neighboring gene uncharacterized LOC130455431 Neighboring gene uncharacterized LOC130455430 Neighboring gene target of myb1 like 2 membrane trafficking protein Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol regulatory element-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077233.1 Reference mMonDom1.pri

    Range
    279729787..279799857 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056804481.1 → XP_056660459.1  sterol regulatory element-binding protein 1 isoform X1

  2. XM_056804482.1 → XP_056660460.1  sterol regulatory element-binding protein 1 isoform X2

  3. XM_056804485.1 → XP_056660463.1  sterol regulatory element-binding protein 1 isoform X5

  4. XM_056804484.1 → XP_056660462.1  sterol regulatory element-binding protein 1 isoform X4

  5. XM_056804483.1 → XP_056660461.1  sterol regulatory element-binding protein 1 isoform X3

Nucleotide Protein
Heading Accession and Version

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