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TRPT1 tRNA phosphotransferase 1 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100028474, updated on 8-Mar-2024

Summary

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Gene symbol
TRPT1
Gene description
tRNA phosphotransferase 1
See related
Ensembl:ENSMODG00000010226
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 6 NC_077232.1 (9424658..9434836)
103 previous assembly MonDom5 (GCF_000002295.2) Unplaced Scaffold NW_001582074.1 (4010..14276)

Chromosome 6 - NC_077232.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 14B Neighboring gene translation initiation factor IF-2 Neighboring gene FKBP prolyl isomerase 2 Neighboring gene nudix hydrolase 22 Neighboring gene FERM domain containing kindlin 3 Neighboring gene stress induced phosphoprotein 1 Neighboring gene uncharacterized LOC130454958

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA 2'-phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA 2'-phosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077232.1 Reference mMonDom1.pri

    Range
    9424658..9434836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016426853.2 → XP_016282339.2  tRNA 2'-phosphotransferase 1 isoform X3

  2. XM_056801529.1 → XP_056657507.1  tRNA 2'-phosphotransferase 1 isoform X3

  3. XM_056801527.1 → XP_056657505.1  tRNA 2'-phosphotransferase 1 isoform X2

  4. XM_001378462.5 → XP_001378499.4  tRNA 2'-phosphotransferase 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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