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TMTC4 transmembrane O-mannosyltransferase targeting cadherins 4 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100025862, updated on 8-Mar-2024

Summary

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Gene symbol
TMTC4
Gene description
transmembrane O-mannosyltransferase targeting cadherins 4
See related
Ensembl:ENSMODG00000007425
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 8 NC_077234.1 (166405264..166484838, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 7 NC_008807.1 (96728583..96808125)

Chromosome 8 - NC_077234.1Genomic Context describing neighboring genes Neighboring gene propionyl-CoA carboxylase subunit alpha Neighboring gene uncharacterized LOC103092279 Neighboring gene 5-azacytidine-induced protein 2-like Neighboring gene gamma-glutamylamine cyclotransferase Neighboring gene uncharacterized LOC103106449 Neighboring gene sodium leak channel, non-selective Neighboring gene U6atac minor spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC4
Names
transmembrane and tetratricopeptide repeat containing 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077234.1 Reference mMonDom1.pri

    Range
    166405264..166484838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007501341.3 → XP_007501403.1  protein O-mannosyl-transferase TMTC4

    UniProtKB/TrEMBL
    A0A5F8GCP5, F7EDY0
    Related
    ENSMODP00000045066.1
    Conserved Domains (6) summary
    sd00006
    Location:482 → 510
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:686 → 717
    TPR_1; Tetratricopeptide repeat
    pfam07719
    Location:482 → 515
    TPR_2; Tetratricopeptide repeat
    pfam08409
    Location:292 → 366
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:481 → 547
    TPR_11; TPR repeat
    pfam13431
    Location:504 → 537
    TPR_17; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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