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LOC100025070 spondin-2 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100025070, updated on 2-Nov-2023

Summary

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Gene symbol
LOC100025070
Gene description
spondin-2
See related
Ensembl:ENSMODG00000004394
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Also known as
SPON2
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Genomic context

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Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 6 NC_077232.1 (75990271..76005615, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 5 NC_008805.1 (236235452..236250806)

Chromosome 6 - NC_077232.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 212 Neighboring gene transmembrane emp24 domain-containing protein 11-like Neighboring gene uncharacterized LOC103096093 Neighboring gene microRNA mir-7262m Neighboring gene microRNA mir-12297e-1 Neighboring gene C-terminal binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spondin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077232.1 Reference mMonDom1.pri

    Range
    75990271..76005615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007496870.3 → XP_007496932.1  spondin-2

    See identical proteins and their annotated locations for XP_007496932.1

    UniProtKB/TrEMBL
    F6SVP6
    Conserved Domains (2) summary
    smart00209
    Location:279 → 329
    TSP1; Thrombospondin type 1 repeats
    pfam06468
    Location:43 → 229
    Spond_N; Spondin_N

  2. XM_007496869.2 → XP_007496931.1  spondin-2

    See identical proteins and their annotated locations for XP_007496931.1

    UniProtKB/TrEMBL
    F6SVP6
    Related
    ENSMODP00000005415.2
    Conserved Domains (2) summary
    smart00209
    Location:279 → 329
    TSP1; Thrombospondin type 1 repeats
    pfam06468
    Location:43 → 229
    Spond_N; Spondin_N
Nucleotide Protein
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