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SORBS1 sorbin and SH3 domain containing 1 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100023075, updated on 3-Apr-2024

Summary

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Gene symbol
SORBS1
Gene description
sorbin and SH3 domain containing 1
See related
Ensembl:ENSMODG00000005240
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
35
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 1 NC_077227.1 (80543266..80865477)
103 previous assembly MonDom5 (GCF_000002295.2) 1 NC_008801.1 (76063303..76389502)

Chromosome 1 - NC_077227.1Genomic Context describing neighboring genes Neighboring gene tectonic family member 3 Neighboring gene aldehyde dehydrogenase 18 family member A1 Neighboring gene uncharacterized LOC130454991 Neighboring gene PDZ and LIM domain 1 Neighboring gene cytochrome P450 2C19-like Neighboring gene uncharacterized LOC130455017

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-substrate adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-substrate junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorbin and SH3 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077227.1 Reference mMonDom1.pri

    Range
    80543266..80865477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056801998.1 → XP_056657976.1  sorbin and SH3 domain-containing protein 1 isoform X19

  2. XM_056802112.1 → XP_056658090.1  sorbin and SH3 domain-containing protein 1 isoform X43

  3. XM_056802016.1 → XP_056657994.1  sorbin and SH3 domain-containing protein 1 isoform X23

  4. XM_056802087.1 → XP_056658065.1  sorbin and SH3 domain-containing protein 1 isoform X38

  5. XM_056802106.1 → XP_056658084.1  sorbin and SH3 domain-containing protein 1 isoform X42

  6. XM_056802042.1 → XP_056658020.1  sorbin and SH3 domain-containing protein 1 isoform X30

  7. XM_056802142.1 → XP_056658120.1  sorbin and SH3 domain-containing protein 1 isoform X47

  8. XM_007478759.3 → XP_007478821.1  sorbin and SH3 domain-containing protein 1 isoform X48

    UniProtKB/TrEMBL
    A0A5F8GWL3
    Conserved Domains (4) summary
    cd11916
    Location:691 → 749
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:513 → 567
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:587 → 644
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:217 → 258
    Sorb; Sorbin homologous domain

  9. XM_056802025.1 → XP_056658003.1  sorbin and SH3 domain-containing protein 1 isoform X25

  10. XM_056802055.1 → XP_056658033.1  sorbin and SH3 domain-containing protein 1 isoform X33

  11. XM_007478763.3 → XP_007478825.1  sorbin and SH3 domain-containing protein 1 isoform X40

    UniProtKB/TrEMBL
    A0A5F8GSY2
    Conserved Domains (4) summary
    cd11916
    Location:741 → 799
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:563 → 617
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:637 → 694
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:217 → 258
    Sorb; Sorbin homologous domain

  12. XM_056802037.1 → XP_056658015.1  sorbin and SH3 domain-containing protein 1 isoform X29

  13. XM_007478756.3 → XP_007478818.2  sorbin and SH3 domain-containing protein 1 isoform X35

  14. XM_056802102.1 → XP_056658080.1  sorbin and SH3 domain-containing protein 1 isoform X41

  15. XM_056802006.1 → XP_056657984.1  sorbin and SH3 domain-containing protein 1 isoform X21

  16. XM_007478760.3 → XP_007478822.1  sorbin and SH3 domain-containing protein 1 isoform X49

    UniProtKB/TrEMBL
    A0A5F8GWL3
    Conserved Domains (4) summary
    cd11916
    Location:682 → 740
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:504 → 558
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:578 → 635
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:208 → 249
    Sorb; Sorbin homologous domain

  17. XM_056802081.1 → XP_056658059.1  sorbin and SH3 domain-containing protein 1 isoform X37

  18. XM_056801929.1 → XP_056657907.1  sorbin and SH3 domain-containing protein 1 isoform X1

  19. XM_007478728.3 → XP_007478790.2  sorbin and SH3 domain-containing protein 1 isoform X6

  20. XM_007478730.3 → XP_007478792.2  sorbin and SH3 domain-containing protein 1 isoform X7

  21. XM_007478741.3 → XP_007478803.2  sorbin and SH3 domain-containing protein 1 isoform X14

  22. XM_056801944.1 → XP_056657922.1  sorbin and SH3 domain-containing protein 1 isoform X4

  23. XM_056801939.1 → XP_056657917.1  sorbin and SH3 domain-containing protein 1 isoform X3

  24. XM_056801962.1 → XP_056657940.1  sorbin and SH3 domain-containing protein 1 isoform X8

  25. XM_056801966.1 → XP_056657944.1  sorbin and SH3 domain-containing protein 1 isoform X9

  26. XM_056801980.1 → XP_056657958.1  sorbin and SH3 domain-containing protein 1 isoform X15

  27. XM_056801933.1 → XP_056657911.1  sorbin and SH3 domain-containing protein 1 isoform X2

  28. XM_056801969.1 → XP_056657947.1  sorbin and SH3 domain-containing protein 1 isoform X10

  29. XM_056801971.1 → XP_056657949.1  sorbin and SH3 domain-containing protein 1 isoform X11

  30. XM_056802029.1 → XP_056658007.1  sorbin and SH3 domain-containing protein 1 isoform X26

  31. XM_056801946.1 → XP_056657924.1  sorbin and SH3 domain-containing protein 1 isoform X5

  32. XM_056801973.1 → XP_056657951.1  sorbin and SH3 domain-containing protein 1 isoform X12

  33. XM_056802046.1 → XP_056658024.1  sorbin and SH3 domain-containing protein 1 isoform X31

  34. XM_056801985.1 → XP_056657963.1  sorbin and SH3 domain-containing protein 1 isoform X16

  35. XM_056802052.1 → XP_056658030.1  sorbin and SH3 domain-containing protein 1 isoform X32

  36. XM_056801995.1 → XP_056657973.1  sorbin and SH3 domain-containing protein 1 isoform X18

  37. XM_056802062.1 → XP_056658040.1  sorbin and SH3 domain-containing protein 1 isoform X34

  38. XM_056802012.1 → XP_056657990.1  sorbin and SH3 domain-containing protein 1 isoform X22

  39. XM_056802137.1 → XP_056658115.1  sorbin and SH3 domain-containing protein 1 isoform X46

  40. XM_056802022.1 → XP_056658000.1  sorbin and SH3 domain-containing protein 1 isoform X24

  41. XM_056802035.1 → XP_056658013.1  sorbin and SH3 domain-containing protein 1 isoform X28

  42. XM_056802076.1 → XP_056658054.1  sorbin and SH3 domain-containing protein 1 isoform X36

  43. XM_007478758.3 → XP_007478820.2  sorbin and SH3 domain-containing protein 1 isoform X45

  44. XM_056802158.1 → XP_056658136.1  sorbin and SH3 domain-containing protein 1 isoform X50

  45. XM_056801991.1 → XP_056657969.1  sorbin and SH3 domain-containing protein 1 isoform X17

  46. XM_056802095.1 → XP_056658073.1  sorbin and SH3 domain-containing protein 1 isoform X39

  47. XM_056801975.1 → XP_056657953.1  sorbin and SH3 domain-containing protein 1 isoform X13

  48. XM_056802001.1 → XP_056657979.1  sorbin and SH3 domain-containing protein 1 isoform X20

  49. XM_056802120.1 → XP_056658098.1  sorbin and SH3 domain-containing protein 1 isoform X44

  50. XM_056802032.1 → XP_056658010.1  sorbin and SH3 domain-containing protein 1 isoform X27

Nucleotide Protein
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