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KCNC1 potassium voltage-gated channel subfamily C member 1 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100020061, updated on 8-Mar-2024

Summary

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Gene symbol
KCNC1
Gene description
potassium voltage-gated channel subfamily C member 1
See related
Ensembl:ENSMODG00000006734
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 6 NC_077232.1 (68474842..68554708)
103 previous assembly MonDom5 (GCF_000002295.2) 5 NC_008805.1 (243596128..243676011, complement)

Chromosome 6 - NC_077232.1Genomic Context describing neighboring genes Neighboring gene USH1 protein network component harmonin Neighboring gene otogelin Neighboring gene myogenic differentiation 1 Neighboring gene secretion regulating guanine nucleotide exchange factor Neighboring gene uncharacterized LOC130455016 Neighboring gene uncharacterized LOC130455018 Neighboring gene tryptophan hydroxylase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables delayed rectifier potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated potassium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potassium voltage-gated channel subfamily C member 1
Names
potassium voltage-gated channel, Shaw-related subfamily, member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077232.1 Reference mMonDom1.pri

    Range
    68474842..68554708
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001366617.3 → XP_001366654.1  potassium voltage-gated channel subfamily C member 1

    UniProtKB/TrEMBL
    F7CX06
    Related
    ENSMODP00000008346.2
    Conserved Domains (4) summary
    smart00225
    Location:10 → 112
    BTB; Broad-Complex, Tramtrack and Bric a brac
    pfam00520
    Location:235 → 447
    Ion_trans; Ion transport protein
    pfam02214
    Location:10 → 104
    BTB_2; BTB/POZ domain
    pfam07885
    Location:390 → 437
    Ion_trans_2; Ion channel
Nucleotide Protein
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