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PLOD1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100017955, updated on 8-Mar-2024

Summary

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Gene symbol
PLOD1
Gene description
procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
See related
Ensembl:ENSMODG00000010880
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 4 NC_077230.1 (398060962..398111877, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 4 NC_008804.1 (365303835..365354987, complement)

Chromosome 4 - NC_077230.1Genomic Context describing neighboring genes Neighboring gene migration and invasion inhibitory protein Neighboring gene mitofusin 2 Neighboring gene uncharacterized LOC103096784 Neighboring gene KIAA2013 ortholog Neighboring gene uncharacterized LOC103104570

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-lysine 5-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen-lysine,2-oxoglutarate 5-dioxygenase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077230.1 Reference mMonDom1.pri

    Range
    398060962..398111877 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007491413.3 → XP_007491475.2  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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