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HLCS holocarboxylase synthetase [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100012694, updated on 8-Mar-2024

Summary

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Gene symbol
HLCS
Gene description
holocarboxylase synthetase
See related
Ensembl:ENSMODG00000021009
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 4 NC_077230.1 (7616612..7770553, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 4 NC_008804.1 (7302377..7452153, complement)

Chromosome 4 - NC_077230.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130458934 Neighboring gene SIM bHLH transcription factor 2 Neighboring gene GA binding protein transcription factor subunit alpha Neighboring gene ATP synthase peripheral stalk subunit F6 Neighboring gene junctional adhesion molecule 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables biotin-[acetyl-CoA-carboxylase] ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
biotin--protein ligase
Names
holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077230.1 Reference mMonDom1.pri

    Range
    7616612..7770553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007493157.3 → XP_007493219.2  biotin--protein ligase isoform X1

  2. XM_007493158.3 → XP_007493220.2  biotin--protein ligase isoform X2

  3. XM_056825994.1 → XP_056681972.1  biotin--protein ligase isoform X4

  4. XM_056825996.1 → XP_056681974.1  biotin--protein ligase isoform X4

  5. XM_007493159.3 → XP_007493221.2  biotin--protein ligase isoform X3

  6. XM_056825995.1 → XP_056681973.1  biotin--protein ligase isoform X4

  7. XM_001363750.4 → XP_001363787.2  biotin--protein ligase isoform X4

Nucleotide Protein
Heading Accession and Version

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