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RNF43 ring finger protein 43 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100011054, updated on 8-Mar-2024

Summary

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Gene symbol
RNF43
Gene description
ring finger protein 43
See related
Ensembl:ENSMODG00000014712
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 2 NC_077228.1 (181071133..181176479)
103 previous assembly MonDom5 (GCF_000002295.2) 2 NC_008802.1 (174000672..174104181)

Chromosome 2 - NC_077228.1Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 4 Neighboring gene heat shock transcription factor 5 Neighboring gene uncharacterized LOC130457207 Neighboring gene SPT4 homolog, DSIF elongation factor subunit Neighboring gene microRNA mir-142

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Wnt receptor catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077228.1 Reference mMonDom1.pri

    Range
    181071133..181176479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001362915.4 → XP_001362952.1  E3 ubiquitin-protein ligase RNF43 isoform X1

    UniProtKB/TrEMBL
    F7D310
    Related
    ENSMODP00000018391.1
    Conserved Domains (1) summary
    pfam13639
    Location:269 → 311
    zf-RING_2; Ring finger domain

  2. XM_056816501.1 → XP_056672479.1  E3 ubiquitin-protein ligase RNF43 isoform X2

  3. XM_016430326.2 → XP_016285812.1  E3 ubiquitin-protein ligase RNF43 isoform X3

    Conserved Domains (1) summary
    pfam13639
    Location:142 → 184
    zf-RING_2; Ring finger domain

  4. XM_016430324.2 → XP_016285810.1  E3 ubiquitin-protein ligase RNF43 isoform X3

    Conserved Domains (1) summary
    pfam13639
    Location:142 → 184
    zf-RING_2; Ring finger domain

  5. XM_056816502.1 → XP_056672480.1  E3 ubiquitin-protein ligase RNF43 isoform X3

  6. XM_056816503.1 → XP_056672481.1  E3 ubiquitin-protein ligase RNF43 isoform X3

Nucleotide Protein
Heading Accession and Version

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