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SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100010439, updated on 11-Apr-2024

Summary

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Gene symbol
SSU72
Gene description
SSU72 homolog, RNA polymerase II CTD phosphatase
See related
Ensembl:ENSMODG00000006616
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 4 NC_077230.1 (414642428..414684838)
103 previous assembly MonDom5 (GCF_000002295.2) 2 NC_008802.1 (103564746..103606928, complement)

Chromosome 4 - NC_077230.1Genomic Context describing neighboring genes Neighboring gene Golgi integral membrane protein 4-like Neighboring gene microRNA mir-7261 Neighboring gene fibronectin type III domain containing 10 Neighboring gene ATPase family AAA domain containing 3A Neighboring gene transmembrane protein 240

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II CTD heptapeptide repeat phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in termination of RNA polymerase II transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA polymerase II subunit A C-terminal domain phosphatase SSU72
Names
SSU72 RNA polymerase II CTD phosphatase homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077230.1 Reference mMonDom1.pri

    Range
    414642428..414684838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001362823.5 → XP_001362860.1  RNA polymerase II subunit A C-terminal domain phosphatase SSU72

    UniProtKB/TrEMBL
    F7GEV0
    Related
    ENSMODP00000008205.1
    Conserved Domains (1) summary
    pfam04722
    Location:6 → 194
    Ssu72; Ssu72-like protein
Nucleotide Protein
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