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Items: 11

1.

NuGO array (human) NuGO_Hs1a520180 [CDF: Hs_ENTREZG_14]

(Submitter supplied) This array is identical to GPL7020 but a custom, remapped CDF environment is used to extract data. This is version 14 of the remapped CDF. The CDF for various platforms can be found at the Web link below.
Organism:
Homo sapiens
6 Series
1 Related Platform
51 Samples
Download data:
GEO
Platform
Accession:
GPL15362
ID:
100015362
2.

Affymetrix GeneChip Human Genome U133 Plus 2.0 Array [CDF: Hs133P_Hs_ENST, version 10]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. Oligonucleotide probes on GeneChips were reorganized based on Ensembl Transcript Ids (Ensembl build: 46) was used as source. For the CDF file: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon. more...
Organism:
Homo sapiens
2 Series
1 Related Platform
139 Samples
Download data:
GEO (CDF, PSI)
Platform
Accession:
GPL9486
ID:
100009486
3.

Affymetrix Rat Expression 230A Array [CDF: RAE230A_Rn_ENTREZG]

(Submitter supplied) Custom CDF (Brainarray v11.0.1); Entrez Gene. Affymetrix RAE230A with Alternative Entrez Gene ID Mappings (v11.0.1). Protocol: GPL341 using Entrez Gene custom CDF available from: http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/11.0.1/entrezg.asp
Organism:
Rattus norvegicus
1 Series
1 Related Platform
48 Samples
Download data:
GEO (CDF)
Platform
Accession:
GPL8627
ID:
100008627
4.

Affymetrix GeneChip Rat Genome 230 2.0 Array [CDF:Rn230_Rn_ENTREZG]

(Submitter supplied) This platform is identical to GPL1355 but a custom CDF environment was used to extract data. We used CDF: Rn230_Rn_ENTREZG (version 10). The CDF can be found at the Web link below. Protocol: see manufacturer's web site
Organism:
Rattus norvegicus
3 Series
1 Related Platform
113 Samples
Download data:
GEO (TAR)
Platform
Accession:
GPL8201
ID:
100008201
5.

Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_10]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. Oligonucleotide probes on GeneChips were reorganized based on the latest genome and transcriptome information. In this particular case the Entrez Gene database (build: Jun 28, 2007) was used as source. For the CDF file based on Entrez Gene: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon. more...
Organism:
Mus musculus
2 DataSets
13 Series
1 Related Platform
261 Samples
Download data:
GEO (TAR)
Platform
Accession:
GPL7546
ID:
100007546
6.

NuGO array (mouse) NuGO_Mm1a520177 [CDF: Mm_ENTREZG_10]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. Oligonucleotide probes on GeneChips were reorganized based on the latest genome and transcriptome information. In this particular case the Entrez Gene database (build: Sept 11, 2006) was used as source. For the CDF file based on Entrez Gene: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon. more...
Organism:
Mus musculus
2 Series
1 Related Platform
40 Samples
Download data:
GEO (TAR)
Platform
Accession:
GPL7441
ID:
100007441
7.

NuGO array (human) NuGO_Hs1a520180 [CDF: Hs_ENTREZG_10]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. Oligonucleotide probes on GeneChips were reorganized based on the latest genome and transcriptome information. In this particular case the Entrez Gene database (build: Sept 11, 2006) was used as source. For the CDF file based on Entrez Gene: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon. more...
Organism:
Homo sapiens
1 DataSet
2 Series
1 Related Platform
180 Samples
Download data:
GEO (CDF)
Platform
Accession:
GPL7144
ID:
100007144
8.

Affymetrix GeneChip Human Genome U133 Plus 2.0 Array [CDF: Hs_ENTREZG_10]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. Oligonucleotide probes on GeneChips were reorganized based on the latest genome and transcriptome information. In this particular case the Entrez Gene database (build: Sept 11, 2006) was used as source. For the CDF file based on Entrez Gene: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon. more...
Organism:
Homo sapiens
1 Series
32 Samples
Download data:
GEO
Platform
Accession:
GPL6823
ID:
100006823
9.

Affymetrix GeneChip Human Genome U133 Plus 2.0 Array [CDF: Hs_ENTREZG_10]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. Oligonucleotide probes on GeneChips were reorganized based on the latest genome and transcriptome information. In this particular case the Entrez Gene database (build: Sept 11, 2006) was used as source. For the CDF file based on Entrez Gene: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon. more...
Organism:
Homo sapiens
7 Series
1 Related Platform
76 Samples
Download data:
GEO
Platform
Accession:
GPL6791
ID:
100006791
10.

Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_9]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. Oligonucleotide probes on GeneChips were reorganized based on the latest genome and transcriptome information. In this particular case the Entrez Gene database (build: 05/04/2006) was used as source. For the CDF file based on Entrez Gene: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon. more...
Organism:
Mus musculus
1 DataSet
1 Series
1 Related Platform
24 Samples
Download data:
GEO (R, RD, RDA, TXT)
Platform
Accession:
GPL5766
ID:
100005766
11.

Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_8]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. After probe sequences are BLASTed against the latest UniGene Build and genome sequence, a series of filtering and grouping criteria are applied for different CDF files. For the CDF file based on Entrez Gene: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon; For detailed description please see the paper. more...
Organism:
Mus musculus
2 Series
1 Related Platform
21 Samples
Download data:
GEO (CDF)
Platform
Accession:
GPL5008
ID:
100005008
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db=gds|term=|query=1|qty=3|blobid=NCID_1_4966405_130.14.18.34_9001_1472588310_1622575040_0MetA0_S_MegaStore_F_1|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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