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Links from GEO DataSets

Items: 8

1.

A Characterization of Osteoblastic and Osteolytic Proteins in Prostate Cancer Bone Metastases

(Submitter supplied) Our goal was to determine whether previously identified and novel proteins are associated with the osteoblastic or osteolytic response in clinical specimens of PCa bone metastases.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL15659
14 Samples
Download data: TXT
Series
Accession:
GSE41619
ID:
200041619
2.

Osteoblastic response in human bone marrow stromal cells

(Submitter supplied) Our goal was to determine whether osteoblastic LuCaP 23.1 prostate cancer xenograft tumors can elicit an osteoblastic response at the gene expression level in human bone marrow stromal cells.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL15659
6 Samples
Download data: TXT
Series
Accession:
GSE48907
ID:
200048907
3.

Genome-wide analysis of gene expression in isoflavone and 3,3’-diindolylmethane treated C4-2B prostate cancer cells

(Submitter supplied) Expression profiling of isoflavone and 3,3’-diindolylmethane treated C4-2B prostate cancer cells was conducted using Affymetrix Human Genome U133 Plus 2.0. Array
Organism:
Homo sapiens
Type:
Expression profiling by array
Dataset:
GDS4123
Platform:
GPL570
5 Samples
Download data: CEL
Series
Accession:
GSE35324
ID:
200035324
4.
Full record GDS4123

Isoflavone and 3,3’-diindolylmethane effect on C4-2B prostate cancer cells

Analysis of C4-2B prostate cancer (PCa) cells treated with isoflavone (IsoF) and 3,3’- diindolylmethane (B-DIM) for up to 72 hours. IsoF and B-DIM inhibited the signal transductions in PCa signaling. Results provide insight into molecular mechanisms underlying PCa growth.
Organism:
Homo sapiens
Type:
Expression profiling by array, count, 3 agent, 4 time sets
Platform:
GPL570
Series:
GSE35324
5 Samples
Download data: CEL
5.

Effects of prostate cancer cells on osteoblasts

(Submitter supplied) Primary murine osteoblasts were isolated form the calvariae of newborn mice. 10 days after the addition of ascorbic acid (50 µg/ml) and ß-glycerophosphate (10 mM), cells were serum-starved over night and then incubated for 6 hours with condtioned medium of MDA-PCa2b cells or conditioned medium of PC-3 cells Keywords: expression profiling by array
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL1261
2 Samples
Download data: CEL, CHP
Series
Accession:
GSE17348
ID:
200017348
6.

Transcriptome of the bone metastasis associated stroma

(Submitter supplied) The reciprocal interaction between cancer cells and the tissue-specific stroma is critical for primary and metastatic tumor growth progression. Prostate cancer cells colonize preferentially bone (osteotropism), where they alter the physiological balance between osteoblast-mediated bone formation and osteoclast-mediated bone resorption, and elicit prevalently an osteoblastic response (osteoinduction). more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL8321
13 Samples
Download data: CEL
Series
Accession:
GSE22813
ID:
200022813
7.

KLF4 as a rheostat of osteolysis and osteogenesis in prostate tumors in the bone

(Submitter supplied) We previously found that KLF4, a gene highly expressed in adult prostate stem cells, blocks the progression of indolent intraepithelial prostatic lesions into aggressive and rapidly growing tumors. To test whether this anti-cancer effect of KLF4 can also prevent prostate cancer-induced damage to the bone, we ablated KLF4 in human PC3 prostate cancer cells using CRISPR/Cas9-mediated genome editing and compared their behavior to null cells transduced with a DOX inducible KLF4 expression system. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16791
8 Samples
Download data: BW
8.

RNA-seq of prostate cancer cell lines co-culture with osteoblasts or osteoclasts

(Submitter supplied) Clinically, osteolytic phenotype is rare in prostate cancer. The molecular mechanism of bone metastasis in PCa is not fully understood. We performed RNA-seq to identify osteogenic and tumor associated roles in prostate cancer by a co-culture of osteoblasts (MG63) and prostate cancer cells (C4-2, C4-2B, 22Rv1 and DU145). We compared osteoblastic prostate cancer with osteolytic prostate cancer to evaluate the difference in phenotype of bone metastasis.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL28038
36 Samples
Download data: TSV
Series
Accession:
GSE210729
ID:
200210729
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Supplemental Content

db=gds|term=|query=1|qty=3|blobid=MCID_66287e9bf4364867152239b9|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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