DNA methylation - Human fibroblast, CHP-SKN-1 cell line, dermis
ESX000000114 - Experiment
Summary
DNA methylation assayed by bisulfite-seq in Homo sapiens. From Hodges, et al. 2009.
Keyword: DNA methylation
Genome track
| Track name: | CHPSKN1_Biulfite_seq |
| Genome release: | GRCh37 (hg19) |
| File type: | WIG |
| File: | ESX000000114.wig.gz |
| Note: |
1 - Data were not submitted in wig format. Tracks were generated by NCBI from submitted raw data. See how. |
DownloadView on Genome
Experimental details
| Feature: | DNA methylation |
| Technique: | bisulfite-seq |
| Instrument: | Illumina Genome Analyzer II |
| Assay Type: | DNA methylation |
Study
High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing
Global DNA methylation is examined by bisulfite-seq in both human primary and cancer cell lines. H3K4me2 and H3K36me3 are also examined.
Data submission
High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing
DNA methylation stabilizes developmentally programmed gene expression states. Aberrant methylation is associated with disease progression and is a common feature of cancer genomes. Presently, few methods enable quantitative, large-scale, single-base resolution mapping of DNA methylation states in ...
Cold Spring Harbor Laboratory. Public on: Jul 08 2009
GSM425461 - GEOSRA
Reference
High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing.
Hodges E, et al. Genome Res. 2009 Sep;19(9):1593-605. - Similar
PMID: 19581485 -
Citation