Mouse embryonic stem cell, V6.5 cell line, undifferentiated, passage 10-15
ESX000000069 - Experiment
Summary
Input control assayed by ChIP-seq in Mus musculus, strain 129SvJae x C57BL/6. From Mikkelsen, et al. 2007.
Keyword: H3
Genome track
| Track name: | ES_H3_ChIPSeq |
| Genome release: | |
| File type: | WIG |
| File: | |
| Note: |
1 - Data were not submitted in wig format. Tracks were generated by NCBI from submitted raw data. See how. |
View on Genome
Experimental details
| Feature: | H3 |
| Antibody: | Abcam 1791 |
| Technique: | ChIP-seq |
| Instrument: | Illumina Genome Analyzer |
| Assay Type: | input control |
Study
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
Histone modifications are examined in a variety of mouse cell types (undifferentiated and differentiated). Embryonic stem cells, embryonic fibroblasts, and neural progenitor cells are examined in this study.
Data submission
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
Genome-wide maps of chromatin state (H3K4me3, H3K9me3, H3K27me3, H3K36me3, H4K20me3) in pluripotent and lineage-committed cells We report the application of single-molecule-based sequencing technology for high-throughput profiling of histone modifications in mammalian cells. By obtaining over four ...
Broad Institute. Public on: Jul 25 2008
GSM307624 - GEOSRA
Reference
Chromatin profiling by directly sequencing small quantities of immunoprecipitated DNA.
Goren A, et al. Nat Methods. 2010 Jan;7(1):47-9. - Similar
PMID: 19946276 -
Citation
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells.
Mikkelsen TS, et al. Nature. 2007 Aug 2;448(7153):553-60. - Similar
PMID: 17603471 -
Citation