CTCF Binding Sites by ChIP-seq from ENCODE/University of Washington

Samples

Human fibroblast, AG04449 cell line, skin, fetus

ESM001223 - Similar

Human fibroblast, AG04450 cell line, lung, fetus

ESM001224 - Similar

Human fibroblast, AG09309 cell line, skin, adult

ESM001225 - Similar

Human fibroblast, AG09319 cell line, gum, adult

ESM001226 - Similar

Human fibroblast, AG10803 cell line, skin, adult

ESM001227 - Similar

Human fibroblast, AoAF cell line, aortic adventitia

ESM001228 - Similar

Human fibroblast, BJ cell line, foreskin, newborn

ESM001229 - Similar

Human colorectal carcinoma epithelial cell, Caco-2 cell line, colon, adult

ESM001230 - Similar

Human lymphoblastoid cell, GM06990 cell line, blood, adult

ESM001231 - Similar

Human , GM12801 cell line, blood, adult

ESM001232 - Similar

Human , GM12864 cell line, blood, adult

ESM001233 - Similar

Human , GM12865 cell line, blood, adult

ESM001234 - Similar

Human , GM12872 cell line, blood, adult

ESM001235 - Similar

Human , GM12873 cell line, blood, adult

ESM001236 - Similar

Human , GM12874 cell line, blood, adult

ESM001237 - Similar

Human , GM12875 cell line, blood, adult

ESM001238 - Similar

Human lymphoblastoid cell, GM12878 cell line, blood, adult

ESM001239 - Similar

Human astrocyte, HA-sp cell line, spinal cord

ESM001240 - Similar

Human endothelial cell, HBMEC cell line, brain microvascular tissue

ESM001241 - Similar

Human cardiac fibroblast, HCF cell line, heart

ESM001242 - Similar

Human fibroblast, HCFaa cell line, adult

ESM001243 - Similar

Human cardiac myocyte, HCM cell line, heart

ESM001244 - Similar

Human epithelial cell, HCPEpiC cell line, choroid plexus

ESM001245 - Similar

Human colorectal carcinoma epithelial cell, HCT-116 cell line, carcinoma

ESM001246 - Similar

Human epithelial cell, HEEpiC cell line, esophagus

ESM001247 - Similar

Human epithelial cell, HEK293 cell line, kidney, fetus

ESM001248 - Similar

Human cervical cancer epithelial cell, HeLa S3 cell line, adenocarcinoma, adult

ESM001249 - Similar

Human hepatocellular carcinoma epithelial cell, HepG2 cell line, liver, carcinoma, adolescent

ESM001250 - Similar

Human acute promyelocytic leukemia promyeloblast, HL60 cell line, peripheral blood, adult

ESM001251 - Similar

Human epithelial cell, HMEC cell line, mammary gland, adult

ESM001252 - Similar

Human fibroblast, HMF cell line, mammary gland, adult

ESM001253 - Similar

Human fibroblast, HPAF cell line, pulmonary artery

ESM001254 - Similar

Human fibroblast, HPF cell line, pulmonary

ESM001255 - Similar

Human renal epithelial cell, HRE cell line, kidney

ESM001256 - Similar

Human retinal pigment epithelial cell, HRPEpiC cell line, retina epithelium

ESM001257 - Similar

Human endothelial cell, HUVEC cell line, umbilical vein

ESM001258 - Similar

Human fibroblast, HVMF cell line, villous mesenchyme

ESM001259 - Similar

Human acute T cell leukemia T lymphocyte, Jurkat cell line, peripheral blood, adolescent

ESM001260 - Similar

Human chronic myelogenous leukemia lymphoblast, K562 cell line, bone marrow, adult

ESM001261 - Similar

Human breast cancer epithelial cell, MCF7 cell line, mammary gland, breast ductal adenocarcinoma, adult

ESM001262 - Similar

Human acute promyelocytic leukemia blast cell, NB4 cell line, bone marrow, adult

ESM001263 - Similar

Human fibroblast, NHDF-neo cell line, epidermis, neonate

ESM001264 - Similar

Human keratinocyte, NHEK cell line, epidermis

ESM001265 - Similar

Human small airway epithelial cell, SAEC cell line, bronchiole epithelium

ESM001266 - Similar

Human neuroblastoma epithelial cell, SK-N-SH (HTB-11) cell line, child, differentiated

ESM001267 - Similar

Human retinoblastoma neural/glial cell, WERI-Rb-1 cell line, retina, infant

ESM001268 - Similar

Total: 46 samples - View details

Experiments

• CTCF (69)
• input control (46)

Total: 115 experiments - View detailsDownload tracksView on genome

Data submission

CTCF Binding Sites by ChIP-seq from ENCODE/University of Washington

This track is produced as part of the ENCODE Project. This track displays maps of genome-wide binding of the CTCF transcription factor in different cell lines using ChIP-seq high-throughput sequencing For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://ww...

UCSC. Public on: Jun 29 2011

GSE30263 - GEOSRA

Reference

The ENCODE (ENCyclopedia Of DNA Elements) Project.

ENCODE Project Consortium Science. 2004 Oct 22;306(5696):636-40. - Similar

PMID: 15499007 - Citation