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nsv970724

  • Variant Calls:7
  • Validation:Not tested
  • Region Size:6,617

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 135 SVs from 40 studies. See in: genome view    
Remapped(Score: Perfect):28,810,367-28,816,983Question Mark
Overlapping variant regions from other studies: 17 SVs from 8 studies. See in: genome view    
Remapped(Score: Perfect):75,960-82,576Question Mark
Overlapping variant regions from other studies: 17 SVs from 8 studies. See in: genome view    
Remapped(Score: Perfect):75,934-82,550Question Mark
Overlapping variant regions from other studies: 17 SVs from 8 studies. See in: genome view    
Remapped(Score: Perfect):75,969-82,585Question Mark
Overlapping variant regions from other studies: 17 SVs from 8 studies. See in: genome view    
Remapped(Score: Perfect):75,946-82,562Question Mark
Overlapping variant regions from other studies: 135 SVs from 40 studies. See in: genome view    
Remapped(Score: Perfect):28,778,144-28,784,760Question Mark
Overlapping variant regions from other studies: 17 SVs from 8 studies. See in: genome view    
Remapped(Score: Perfect):81,554-88,170Question Mark
Overlapping variant regions from other studies: 16 SVs from 7 studies. See in: genome view    
Remapped(Score: Perfect):81,545-88,161Question Mark
Overlapping variant regions from other studies: 27 SVs from 12 studies. See in: genome view    
Remapped(Score: Perfect):81,545-88,161Question Mark
Overlapping variant regions from other studies: 17 SVs from 8 studies. See in: genome view    
Remapped(Score: Perfect):81,545-88,161Question Mark
Overlapping variant regions from other studies: 28 SVs from 12 studies. See in: genome view    
Submitted genomic28,886,123-28,892,739Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv970724RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr628,810,36728,816,983
nsv970724RemappedPerfectGRCh38.p12ALT_REF_LOCI_5Second PassNT_167247.2Chr6|NT_16
7247.2
75,96082,576
nsv970724RemappedPerfectGRCh38.p12ALT_REF_LOCI_4Second PassNT_167246.2Chr6|NT_16
7246.2
75,93482,550
nsv970724RemappedPerfectGRCh38.p12ALT_REF_LOCI_3Second PassNT_167245.2Chr6|NT_16
7245.2
75,96982,585
nsv970724RemappedPerfectGRCh38.p12ALT_REF_LOCI_1Second PassNT_167244.2Chr6|NT_16
7244.2
75,94682,562
nsv970724RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr628,778,14428,784,760
nsv970724RemappedPerfectGRCh37.p13ALT_REF_LOCI_3Second PassNT_167245.1Chr6|NT_16
7245.1
81,55488,170
nsv970724RemappedPerfectGRCh37.p13ALT_REF_LOCI_5Second PassNT_167247.1Chr6|NT_16
7247.1
81,54588,161
nsv970724RemappedPerfectGRCh37.p13ALT_REF_LOCI_6Second PassNT_167248.1Chr6|NT_16
7248.1
81,54588,161
nsv970724RemappedPerfectGRCh37.p13ALT_REF_LOCI_1Second PassNT_167244.1Chr6|NT_16
7244.1
81,54588,161
nsv970724Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000006.10Chr628,886,12328,892,739

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisCopy numberOther Calls in this Sample and Study
nssv2756935duplicationPongo_abelii-KB4361_DennisSequencingRead depth39,401
nssv2757347duplicationPongo_abelii-KB9258_BubblesSequencingRead depth39,569
nssv2758301duplicationPongo_abelii-A953_VickiSequencingRead depth39,401
nssv2759722duplicationSAMN01920542SequencingRead depth39,384
nssv2759751duplicationSAMN01920544SequencingRead depth39,385
nssv2760986duplicationPongo_abelii-SB550_SibuSequencingRead depth39,415
nssv2766463duplicationPongo_abelii-KB5883_LikoeSequencingRead depth39,397

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv2756935RemappedPerfectNT_167246.2:g.(?_7
5934)_(82550_?)dup
GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2
75,93482,550
nssv2757347RemappedPerfectNT_167246.2:g.(?_7
5934)_(82550_?)dup
GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2
75,93482,550
nssv2758301RemappedPerfectNT_167246.2:g.(?_7
5934)_(82550_?)dup
GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2
75,93482,550
nssv2759722RemappedPerfectNT_167246.2:g.(?_7
5934)_(82550_?)dup
GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2
75,93482,550
nssv2759751RemappedPerfectNT_167246.2:g.(?_7
5934)_(82550_?)dup
GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2
75,93482,550
nssv2760986RemappedPerfectNT_167246.2:g.(?_7
5934)_(82550_?)dup
GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2
75,93482,550
nssv2766463RemappedPerfectNT_167246.2:g.(?_7
5934)_(82550_?)dup
GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2
75,93482,550
nssv2756935RemappedPerfectNT_167247.2:g.(?_7
5960)_(82576_?)dup
GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2
75,96082,576
nssv2757347RemappedPerfectNT_167247.2:g.(?_7
5960)_(82576_?)dup
GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2
75,96082,576
nssv2758301RemappedPerfectNT_167247.2:g.(?_7
5960)_(82576_?)dup
GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2
75,96082,576
nssv2759722RemappedPerfectNT_167247.2:g.(?_7
5960)_(82576_?)dup
GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2
75,96082,576
nssv2759751RemappedPerfectNT_167247.2:g.(?_7
5960)_(82576_?)dup
GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2
75,96082,576
nssv2760986RemappedPerfectNT_167247.2:g.(?_7
5960)_(82576_?)dup
GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2
75,96082,576
nssv2766463RemappedPerfectNT_167247.2:g.(?_7
5960)_(82576_?)dup
GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2
75,96082,576
nssv2756935RemappedPerfectNT_167245.2:g.(?_7
5969)_(82585_?)dup
GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2
75,96982,585
nssv2757347RemappedPerfectNT_167245.2:g.(?_7
5969)_(82585_?)dup
GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2
75,96982,585
nssv2758301RemappedPerfectNT_167245.2:g.(?_7
5969)_(82585_?)dup
GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2
75,96982,585
nssv2759722RemappedPerfectNT_167245.2:g.(?_7
5969)_(82585_?)dup
GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2
75,96982,585
nssv2759751RemappedPerfectNT_167245.2:g.(?_7
5969)_(82585_?)dup
GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2
75,96982,585
nssv2760986RemappedPerfectNT_167245.2:g.(?_7
5969)_(82585_?)dup
GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2
75,96982,585
nssv2766463RemappedPerfectNT_167245.2:g.(?_7
5969)_(82585_?)dup
GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2
75,96982,585
nssv2756935RemappedPerfectNT_167244.2:g.(?_7
5946)_(82562_?)dup
GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2
75,94682,562
nssv2757347RemappedPerfectNT_167244.2:g.(?_7
5946)_(82562_?)dup
GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2
75,94682,562
nssv2758301RemappedPerfectNT_167244.2:g.(?_7
5946)_(82562_?)dup
GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2
75,94682,562
nssv2759722RemappedPerfectNT_167244.2:g.(?_7
5946)_(82562_?)dup
GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2
75,94682,562
nssv2759751RemappedPerfectNT_167244.2:g.(?_7
5946)_(82562_?)dup
GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2
75,94682,562
nssv2760986RemappedPerfectNT_167244.2:g.(?_7
5946)_(82562_?)dup
GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2
75,94682,562
nssv2766463RemappedPerfectNT_167244.2:g.(?_7
5946)_(82562_?)dup
GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2
75,94682,562
nssv2756935RemappedPerfectNC_000006.12:g.(?_
28810367)_(2881698
3_?)dup
GRCh38.p12First PassNC_000006.12Chr628,810,36728,816,983
nssv2757347RemappedPerfectNC_000006.12:g.(?_
28810367)_(2881698
3_?)dup
GRCh38.p12First PassNC_000006.12Chr628,810,36728,816,983
nssv2758301RemappedPerfectNC_000006.12:g.(?_
28810367)_(2881698
3_?)dup
GRCh38.p12First PassNC_000006.12Chr628,810,36728,816,983
nssv2759722RemappedPerfectNC_000006.12:g.(?_
28810367)_(2881698
3_?)dup
GRCh38.p12First PassNC_000006.12Chr628,810,36728,816,983
nssv2759751RemappedPerfectNC_000006.12:g.(?_
28810367)_(2881698
3_?)dup
GRCh38.p12First PassNC_000006.12Chr628,810,36728,816,983
nssv2760986RemappedPerfectNC_000006.12:g.(?_
28810367)_(2881698
3_?)dup
GRCh38.p12First PassNC_000006.12Chr628,810,36728,816,983
nssv2766463RemappedPerfectNC_000006.12:g.(?_
28810367)_(2881698
3_?)dup
GRCh38.p12First PassNC_000006.12Chr628,810,36728,816,983
nssv2756935RemappedPerfectNT_167244.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1
81,54588,161
nssv2756935RemappedPerfectNT_167247.1:g.(?_8
1545)_(88161_?)dup
NT_167247.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1
81,54588,161
nssv2756935RemappedPerfectNT_167248.1:g.(?_8
1545)_(88161_?)dup
NT_167248.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167248.1Chr6|NT_16
7248.1
81,54588,161
nssv2757347RemappedPerfectNT_167244.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1
81,54588,161
nssv2757347RemappedPerfectNT_167247.1:g.(?_8
1545)_(88161_?)dup
NT_167247.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1
81,54588,161
nssv2757347RemappedPerfectNT_167248.1:g.(?_8
1545)_(88161_?)dup
NT_167248.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167248.1Chr6|NT_16
7248.1
81,54588,161
nssv2758301RemappedPerfectNT_167244.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1
81,54588,161
nssv2758301RemappedPerfectNT_167247.1:g.(?_8
1545)_(88161_?)dup
NT_167247.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1
81,54588,161
nssv2758301RemappedPerfectNT_167248.1:g.(?_8
1545)_(88161_?)dup
NT_167248.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167248.1Chr6|NT_16
7248.1
81,54588,161
nssv2759722RemappedPerfectNT_167244.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1
81,54588,161
nssv2759722RemappedPerfectNT_167247.1:g.(?_8
1545)_(88161_?)dup
NT_167247.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1
81,54588,161
nssv2759722RemappedPerfectNT_167248.1:g.(?_8
1545)_(88161_?)dup
NT_167248.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167248.1Chr6|NT_16
7248.1
81,54588,161
nssv2759751RemappedPerfectNT_167244.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1
81,54588,161
nssv2759751RemappedPerfectNT_167247.1:g.(?_8
1545)_(88161_?)dup
NT_167247.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1
81,54588,161
nssv2759751RemappedPerfectNT_167248.1:g.(?_8
1545)_(88161_?)dup
NT_167248.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167248.1Chr6|NT_16
7248.1
81,54588,161
nssv2760986RemappedPerfectNT_167244.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1
81,54588,161
nssv2760986RemappedPerfectNT_167247.1:g.(?_8
1545)_(88161_?)dup
NT_167247.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1
81,54588,161
nssv2760986RemappedPerfectNT_167248.1:g.(?_8
1545)_(88161_?)dup
NT_167248.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167248.1Chr6|NT_16
7248.1
81,54588,161
nssv2766463RemappedPerfectNT_167244.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1
81,54588,161
nssv2766463RemappedPerfectNT_167247.1:g.(?_8
1545)_(88161_?)dup
NT_167247.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1
81,54588,161
nssv2766463RemappedPerfectNT_167248.1:g.(?_8
1545)_(88161_?)dup
NT_167248.1:g.(?_8
1545)_(88161_?)dup
GRCh37.p13Second PassNT_167248.1Chr6|NT_16
7248.1
81,54588,161
nssv2756935RemappedPerfectNT_167245.1:g.(?_8
1554)_(88170_?)dup
NT_167245.1:g.(?_8
1554)_(88170_?)dup
GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1
81,55488,170
nssv2757347RemappedPerfectNT_167245.1:g.(?_8
1554)_(88170_?)dup
NT_167245.1:g.(?_8
1554)_(88170_?)dup
GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1
81,55488,170
nssv2758301RemappedPerfectNT_167245.1:g.(?_8
1554)_(88170_?)dup
NT_167245.1:g.(?_8
1554)_(88170_?)dup
GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1
81,55488,170
nssv2759722RemappedPerfectNT_167245.1:g.(?_8
1554)_(88170_?)dup
NT_167245.1:g.(?_8
1554)_(88170_?)dup
GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1
81,55488,170
nssv2759751RemappedPerfectNT_167245.1:g.(?_8
1554)_(88170_?)dup
NT_167245.1:g.(?_8
1554)_(88170_?)dup
GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1
81,55488,170
nssv2760986RemappedPerfectNT_167245.1:g.(?_8
1554)_(88170_?)dup
NT_167245.1:g.(?_8
1554)_(88170_?)dup
GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1
81,55488,170
nssv2766463RemappedPerfectNT_167245.1:g.(?_8
1554)_(88170_?)dup
NT_167245.1:g.(?_8
1554)_(88170_?)dup
GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1
81,55488,170
nssv2756935RemappedPerfectNC_000006.11:g.(?_
28778144)_(2878476
0_?)dup
GRCh37.p13First PassNC_000006.11Chr628,778,14428,784,760
nssv2757347RemappedPerfectNC_000006.11:g.(?_
28778144)_(2878476
0_?)dup
GRCh37.p13First PassNC_000006.11Chr628,778,14428,784,760
nssv2758301RemappedPerfectNC_000006.11:g.(?_
28778144)_(2878476
0_?)dup
GRCh37.p13First PassNC_000006.11Chr628,778,14428,784,760
nssv2759722RemappedPerfectNC_000006.11:g.(?_
28778144)_(2878476
0_?)dup
GRCh37.p13First PassNC_000006.11Chr628,778,14428,784,760
nssv2759751RemappedPerfectNC_000006.11:g.(?_
28778144)_(2878476
0_?)dup
GRCh37.p13First PassNC_000006.11Chr628,778,14428,784,760
nssv2760986RemappedPerfectNC_000006.11:g.(?_
28778144)_(2878476
0_?)dup
GRCh37.p13First PassNC_000006.11Chr628,778,14428,784,760
nssv2766463RemappedPerfectNC_000006.11:g.(?_
28778144)_(2878476
0_?)dup
GRCh37.p13First PassNC_000006.11Chr628,778,14428,784,760
nssv2756935Submitted genomicNC_000006.10:g.(?_
28886123)_(2889273
9_?)dup
NCBI36 (hg18)NC_000006.10Chr628,886,12328,892,739
nssv2757347Submitted genomicNC_000006.10:g.(?_
28886123)_(2889273
9_?)dup
NCBI36 (hg18)NC_000006.10Chr628,886,12328,892,739
nssv2758301Submitted genomicNC_000006.10:g.(?_
28886123)_(2889273
9_?)dup
NCBI36 (hg18)NC_000006.10Chr628,886,12328,892,739
nssv2759722Submitted genomicNC_000006.10:g.(?_
28886123)_(2889273
9_?)dup
NCBI36 (hg18)NC_000006.10Chr628,886,12328,892,739
nssv2759751Submitted genomicNC_000006.10:g.(?_
28886123)_(2889273
9_?)dup
NCBI36 (hg18)NC_000006.10Chr628,886,12328,892,739
nssv2760986Submitted genomicNC_000006.10:g.(?_
28886123)_(2889273
9_?)dup
NCBI36 (hg18)NC_000006.10Chr628,886,12328,892,739
nssv2766463Submitted genomicNC_000006.10:g.(?_
28886123)_(2889273
9_?)dup
NCBI36 (hg18)NC_000006.10Chr628,886,12328,892,739

No validation data were submitted for this variant

No genotype data were submitted for this variant

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