nsv1195910
- Organism: Homo sapiens
- Study:nstd113 (Polyak et al. 2015)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:927,933
- Publication(s):Polyak et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 5314 SVs from 101 studies. See in: genome view
Overlapping variant regions from other studies: 5289 SVs from 101 studies. See in: genome view
Overlapping variant regions from other studies: 1412 SVs from 28 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv1195910 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 49,812,037 | 50,739,969 |
nsv1195910 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000022.10 | Chr22 | 50,205,685 | 51,178,397 |
nsv1195910 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000022.9 | Chr22 | 48,591,689 | 49,525,263 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv7466534 | copy number loss | 13721 | Oligo aCGH | Probe signal intensity | nssv7475239 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv7466534 | Remapped | Good | NC_000022.11:g.(?_ 49812037)_(5073996 9_?)del | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 49,812,037 | 50,739,969 |
nssv7466534 | Remapped | Good | NC_000022.10:g.(?_ 50205685)_(5117839 7_?)del | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 50,205,685 | 51,178,397 |
nssv7466534 | Submitted genomic | NC_000022.9:g.(?_4 8591689)_(49525263 _?)del | NCBI36 (hg18) | NC_000022.9 | Chr22 | 48,591,689 | 49,525,263 |