dbGSS: database of "Genome Survey Sequences"
PubMed Entrez BLAST OMIM Taxonomy Structure

 

dbGSS Home

Access Links---

Entrez

BLAST Web

FTP GenBank

FTP GSS Reports

FTP FASTA/dbGSS files

FTP FASTA/BLAST file

 

 

   Access to dbGSS Data

  • GSS sequences are included in the GSS division of GenBank available from NCBI by anonymous ftp and through Entrez.

  • The nucleotide sequences may be searched using the BLAST electronic mail server or from the BLAST web pages. For more information send an e-mail message with the word "help" in the body of the message to blast@ncbi.nlm.nih.gov. The TBLASTN program which takes an amino acid query sequence and compares it with six-frame translations of dbGSS DNA sequences is particularly useful.

  • GSS sequences are also available as a flat file in the FASTA format by anonymous FTP in the /repository/dbGSS directory at ncbi.nlm.nih.gov

Rev. 05/28/02