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NM_006439.5(MAB21L2):c.151C>G (p.Arg51Gly) AND Microphthalmia/coloboma and skeletal dysplasia syndrome

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jan 1, 2015
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000490802.1

Allele description

NM_006439.5(MAB21L2):c.151C>G (p.Arg51Gly)

Genes:
LRBA:LPS responsive beige-like anchor protein [Gene - OMIM - HGNC]
MAB21L2:mab-21 like 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
4q31.3
Genomic location:
Preferred name:
NM_006439.5(MAB21L2):c.151C>G (p.Arg51Gly)
HGVS:
  • NC_000004.12:g.150583180C>G
  • NG_032855.1:g.437318G>C
  • NG_042314.1:g.6256C>G
  • NM_001199282.2:c.6330+4868G>C
  • NM_001364905.1:c.6330+4868G>C
  • NM_001367550.1:c.6330+4868G>C
  • NM_006439.5:c.151C>G
  • NM_006726.4:c.6363+4868G>C
  • NP_006430.1:p.Arg51Gly
  • LRG_1324t1:c.6330+4868G>C
  • LRG_1324:g.437318G>C
  • NC_000004.11:g.151504332C>G
  • NM_006439.4:c.151C>G
Protein change:
R51G; ARG51GLY
Links:
OMIM: 604357.0005; dbSNP: rs587777512
NCBI 1000 Genomes Browser:
rs587777512
Molecular consequence:
  • NM_001199282.2:c.6330+4868G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001364905.1:c.6330+4868G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001367550.1:c.6330+4868G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_006726.4:c.6363+4868G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_006439.5:c.151C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Microphthalmia/coloboma and skeletal dysplasia syndrome (MCSKS)
Synonyms:
MICROPHTHALMIA AND/OR COLOBOMA WITH OR WITHOUT RHIZOMELIC SKELETAL DYSPLASIA
Identifiers:
MedGen: C4014540; Orphanet: 424099; OMIM: 615877

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000579393OMIM
no assertion criteria provided
Pathogenic
(Jan 1, 2015)
germlineliterature only

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Mutations in MAB21L2 result in ocular Coloboma, microcornea and cataracts.

Deml B, Kariminejad A, Borujerdi RH, Muheisen S, Reis LM, Semina EV.

PLoS Genet. 2015;11(2):e1005002. doi: 10.1371/journal.pgen.1005002.

PubMed [citation]
PMID:
25719200
PMCID:
PMC4342166

Details of each submission

From OMIM, SCV000579393.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (1)

Description

In 5 affected members of a family with coloboma, microcornea, cataracts, and skeletal dysplasia (MCSKS; 615877), Deml et al. (2015) identified heterozygosity for a c.151C-G transversion in the MAB21L2 gene, resulting in an arg51-to-gly (R51G) substitution at a conserved residue. The mutation segregated with disease in the family and was not found in the Exome Variant Server, dbSNP, or 1000 Genomes Project databases. The proband's unaffected mother showed a low 'G' peak at c.151 in addition to the wildtype 'C' upon sequencing, suggesting low-level mosaicism for the mutation. Functional analysis in HLEB3 cells showed that the R51G mutant was present at levels approximately 32% of those of wildtype MAB21L2, and protein stability assays showed a more rapid decrease in the amount of mutant compared to the wildtype protein at all time points examined, suggesting reduced stability of the R51G mutant. In addition, wildtype MAB21L2 mRNA showed efficient rescue of ocular anomalies in zebrafish embryos homozygous for a mab21l2 frameshift mutation (see ANIMAL MODEL), whereas there was an absence of robust rescue by mutant mRNA (68% versus 14%). No dominant-negative effect for the R51G mutant allele was observed.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 2, 2019