NM_000551.4(VHL):c.341-21_341-17del AND Von Hippel-Lindau syndrome

Germline classification:: Likely benign (1 submission)
Last evaluated:: Feb 26, 2016
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000208857.1

Allele description [Variation Report for NM_000551.4(VHL):c.341-21_341-17del]

NM_000551.4(VHL):c.341-21_341-17del

Genes:

LOC107303340:3p25 von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase Alu-mediated recombination region [Gene]
VHL:von Hippel-Lindau tumor suppressor [Gene - OMIM - HGNC]

Variant type:

Deletion

Cytogenetic location:

3p25.3

Genomic location:

Preferred name:

NM_000551.4(VHL):c.341-21_341-17del

HGVS:

NC_000003.12:g.10146493_10146497del
NG_008212.3:g.9859_9863del
NG_046756.1:g.4255_4259del
NM_000551.4:c.341-21_341-17delMANE SELECT
NM_001354723.2:c.*18-3294_*18-3290del
NM_198156.3:c.341-3294_341-3290del
LRG_322:g.9859_9863del
NC_000003.11:g.10188177_10188181del
NM_000551.3:c.341-21_341-17delAACCT

Links:

dbSNP: rs869025639

NCBI 1000 Genomes Browser:

rs869025639

Molecular consequence:

NM_000551.4:c.341-21_341-17del - intron variant - [Sequence Ontology: SO:0001627]
NM_001354723.2:c.*18-3294_*18-3290del - intron variant - [Sequence Ontology: SO:0001627]
NM_198156.3:c.341-3294_341-3290del - intron variant - [Sequence Ontology: SO:0001627]

Observations:

Condition(s)

Name:: Von Hippel-Lindau syndrome (VHLS)
Synonyms:: VHL syndrome; Von Hippel-Lindau
Identifiers:: MONDO: MONDO:0008667; MedGen: C0019562; Orphanet: 892; OMIM: 193300

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000264720	Genomic Diagnostic Laboratory, Division of Genomic Diagnostics, Children's Hospital of Philadelphia	no assertion criteria provided	Likely benign (Feb 26, 2016)	germline	clinical testing

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000264720

Genomic Diagnostic Laboratory, Division of Genomic Diagnostics, Children's Hospital of Philadelphia

no assertion criteria provided

Likely benign
(Feb 26, 2016)

germline

clinical testing

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	2	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Genomic Diagnostic Laboratory, Division of Genomic Diagnostics, Children's Hospital of Philadelphia, SCV000264720.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	2	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		2	not provided	not provided	not provided

Last Updated: Aug 5, 2023

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