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NM_000059.4(BRCA2):c.551T>C (p.Leu184Pro) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Sep 19, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000200973.2

Allele description [Variation Report for NM_000059.4(BRCA2):c.551T>C (p.Leu184Pro)]

NM_000059.4(BRCA2):c.551T>C (p.Leu184Pro)

Gene:
BRCA2:BRCA2 DNA repair associated [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
13q13.1
Genomic location:
Preferred name:
NM_000059.4(BRCA2):c.551T>C (p.Leu184Pro)
Other names:
p.L184P:CTA>CCA
HGVS:
  • NC_000013.11:g.32326533T>C
  • NG_012772.3:g.16054T>C
  • NM_000059.4:c.551T>CMANE SELECT
  • NP_000050.2:p.Leu184Pro
  • NP_000050.3:p.Leu184Pro
  • LRG_293t1:c.551T>C
  • LRG_293:g.16054T>C
  • LRG_293p1:p.Leu184Pro
  • NC_000013.10:g.32900670T>C
  • NM_000059.3:c.551T>C
  • U43746.1:n.779T>C
Nucleotide change:
779T>C
Protein change:
L184P
Links:
dbSNP: rs80358775
NCBI 1000 Genomes Browser:
rs80358775
Molecular consequence:
  • NM_000059.4:c.551T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000210246GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Uncertain significance
(Sep 19, 2018)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000210246.14

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This variant is denoted BRCA2 c.551T>C at the cDNA level, p.Leu184Pro (L184P) at the protein level, and results in the change of a Leucine to a Proline (CTA>CCA). Using alternate nomenclature, this variant would be defined as BRCA2 779T>C. This variant was observed in a Japanese woman with epithelial ovarian cancer, in three other Japanese individuals referred for BRCA1/2 testing, and in an individual with pancreatic cancer (Sekine 2001, Arai 2017, Takeuchi 2018). This variant was reported to not increase exon skipping in a minigene reporter assay (Di Giacomo 2013). BRCA2 Leu184Pro was not observed in large population cohorts (Lek 2016). This variant is not located in a known functional domain. In silico analysis, which includes protein predictors and evolutionary conservation, supports that this variant does not alter protein structure/function. Based on currently available evidence, it is unclear whether BRCA2 Leu184Pro is a pathogenic or benign variant. We consider it to be a variant of uncertain significance.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jun 2, 2024