NM_175629.2(DNMT3A):c.892G>T (p.Gly298Trp) AND Inborn genetic diseases

Germline classification:
Pathogenic (1 submission)
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000190731.1

Allele description

NM_175629.2(DNMT3A):c.892G>T (p.Gly298Trp)

Gene:
DNMT3A:DNA methyltransferase 3 alpha [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2p23.3
Genomic location:
Preferred name:
NM_175629.2(DNMT3A):c.892G>T (p.Gly298Trp)
HGVS:
  • NC_000002.12:g.25247713C>A
  • NG_029465.2:g.99878G>T
  • NM_022552.4:c.892G>T
  • NM_153759.3:c.325G>T
  • NM_175629.2:c.892G>T
  • NP_072046.2:p.Gly298Trp
  • NP_715640.2:p.Gly109Trp
  • NP_783328.1:p.Gly298Trp
  • LRG_459t1:c.892G>T
  • LRG_459t2:c.325G>T
  • LRG_459t4:c.892G>T
  • LRG_459:g.99878G>T
  • LRG_459p1:p.Gly298Trp
  • LRG_459p2:p.Gly109Trp
  • LRG_459p4:p.Gly298Trp
  • NC_000002.11:g.25470582C>A
  • NM_175629.1:c.892G>T
  • NR_135490.1:n.1230G>T
Protein change:
G109W
Links:
dbSNP: rs797044904
NCBI 1000 Genomes Browser:
rs797044904
Molecular consequence:
  • NM_175629.2:c.892G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_135490.1:n.1230G>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000244172Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Pathogenicgermlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
European-origingermlineyes1not providednot provided1yesclinical testing

Citations

PubMed

Enhanced utility of family-centered diagnostic exome sequencing with inheritance model-based analysis: results from 500 unselected families with undiagnosed genetic conditions.

Farwell KD, Shahmirzadi L, El-Khechen D, Powis Z, Chao EC, Tippin Davis B, Baxter RM, Zeng W, Mroske C, Parra MC, Gandomi SK, Lu I, Li X, Lu H, Lu HM, Salvador D, Ruble D, Lao M, Fischbach S, Wen J, Lee S, Elliott A, et al.

Genet Med. 2015 Jul;17(7):578-86. doi: 10.1038/gim.2014.154. Epub 2014 Nov 13.

PubMed [citation]
PMID:
25356970

Details of each submission

From Ambry Genetics, SCV000244172.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1European-origin1not providedyesclinical testing PubMed (1)

Description

POSITIVE: Relevant Alteration(s) Detected

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Jul 15, 2017