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NM_002693.3(POLG):c.3505G>A (p.Gly1169Ser) AND not provided

Germline classification:
Uncertain significance (2 submissions)
Last evaluated:
Feb 15, 2019
Review status:
2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000188625.19

Allele description [Variation Report for NM_002693.3(POLG):c.3505G>A (p.Gly1169Ser)]

NM_002693.3(POLG):c.3505G>A (p.Gly1169Ser)

Genes:
POLG:DNA polymerase gamma, catalytic subunit [Gene - OMIM - HGNC]
POLGARF:POLG alternative reading frame [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
15q26.1
Genomic location:
Preferred name:
NM_002693.3(POLG):c.3505G>A (p.Gly1169Ser)
Other names:
p.G1169S:GGT>AGT
HGVS:
  • NC_000015.10:g.89317514C>T
  • NG_008218.2:g.22282G>A
  • NG_011736.1:g.78552C>T
  • NM_001126131.2:c.3505G>A
  • NM_002693.3:c.3505G>AMANE SELECT
  • NP_001119603.1:p.Gly1169Ser
  • NP_002684.1:p.Gly1169Ser
  • NP_002684.1:p.Gly1169Ser
  • LRG_765t1:c.3505G>A
  • LRG_500:g.78552C>T
  • LRG_765:g.22282G>A
  • LRG_765p1:p.Gly1169Ser
  • NC_000015.9:g.89860745C>T
  • NM_002693.2:c.3505G>A
Protein change:
G1169S
Links:
dbSNP: rs753864625
NCBI 1000 Genomes Browser:
rs753864625
Molecular consequence:
  • NM_001126131.2:c.3505G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_002693.3:c.3505G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV000242248GeneDx
criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)		Uncertain significance
(Feb 15, 2019) 		germlineclinical testing

Citation Link,

SCV001149554CeGaT Center for Human Genetics Tuebingen
criteria provided, single submitter

(CeGaT Center For Human Genetics Tuebingen Variant Classification Criteria Version 2)		Uncertain significance
(Nov 1, 2016) 		germlineclinical testing

Citation Link

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000242248.12

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

Not observed at a significant frequency in large population cohorts (Lek et al., 2016); In silico analysis, which includes protein predictors and evolutionary conservation, supports a deleterious effect; Has not been previously published as pathogenic or benign to our knowledge

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From CeGaT Center for Human Genetics Tuebingen, SCV001149554.21

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Apr 20, 2024