U.S. flag

An official website of the United States government

NM_001927.3(DES):c.1201G>A (p.Glu401Lys) AND not provided

Germline classification:
Pathogenic (2 submissions)
Last evaluated:
Oct 7, 2014
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000056780.2

Allele description

NM_001927.3(DES):c.1201G>A (p.Glu401Lys)

Gene:
DES:desmin [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2q35
Genomic location:
Preferred name:
NM_001927.3(DES):c.1201G>A (p.Glu401Lys)
Other names:
p.E401K:GAG>AAG
HGVS:
  • NC_000002.12:g.219421517G>A
  • NG_008043.1:g.8141G>A
  • NM_001927.3:c.1201G>A
  • NP_001918.3:p.Glu401Lys
  • LRG_380t1:c.1201G>A
  • LRG_380:g.8141G>A
  • LRG_380p1:p.Glu401Lys
  • NC_000002.11:g.220286239G>A
  • P17661:p.Glu401Lys
Protein change:
E401K
Links:
UniProtKB: P17661#VAR_067211; dbSNP: rs57694264
NCBI 1000 Genomes Browser:
rs57694264
Molecular consequence:
  • NM_001927.3:c.1201G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Identifiers:
MedGen: CN221809

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000087893Epithelial Biology; Institute of Medical Biology, Singapore
no classification provided
not providednot providednot provided

SCV000235816GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Pathogenic
(Oct 7, 2014)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing
not providednot providednot providednot providednot providednot provided1not providedliterature only

Details of each submission

From Epithelial Biology; Institute of Medical Biology, Singapore, SCV000087893.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providednot providednot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1not providednot provided1not providednot providednot providednot providednot providednot provided

From GeneDx, SCV000235816.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

p.Glu401Lys: c.1201 G>A. The E401K mutation in the DES gene has been reported previously in one individual with cardiomyopathy and muscle weakness as a de novo mutation (Goudeau et al., 2006). E401K results in a non-conservative amino acid substitution in the C-terminal end of the 2B helical segment at a position that is conserved across species (Goudeau B et al., 2006;). In addition, functional studies have shown that the E401K mutation results in dysfunctinal desmin filament assembly (Goudeau B et al., 2006; Chourbagi O et al., 2010). Moreover, mutations in nearby residues (L392P, N393I, D399Y, R406W) have been reported in association with desmin related myopathy, further supporting the functional importance of this region of the protein. Furthermore, the E401K mutation was not observed in approximately 6,500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. In summary, E401K in the DES gene is interpreted as a disease-causing mutation The variant is found in DES panel(s).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Feb 26, 2017