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NM_004453.4(ETFDH):c.250G>A (p.Ala84Thr) AND Glutaric acidemia IIc

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Dec 1, 2010
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000012808.23

Allele description [Variation Report for NM_004453.4(ETFDH):c.250G>A (p.Ala84Thr)]

NM_004453.4(ETFDH):c.250G>A (p.Ala84Thr)

Gene:
ETFDH:electron transfer flavoprotein dehydrogenase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
4q32.1
Genomic location:
Preferred name:
NM_004453.4(ETFDH):c.250G>A (p.Ala84Thr)
HGVS:
  • NC_000004.12:g.158682269G>A
  • NG_007078.2:g.14928G>A
  • NM_001281737.2:c.109G>A
  • NM_001281738.1:c.67G>A
  • NM_004453.4:c.250G>AMANE SELECT
  • NP_001268666.1:p.Ala37Thr
  • NP_001268667.1:p.Ala23Thr
  • NP_004444.2:p.Ala84Thr
  • NC_000004.11:g.159603421G>A
  • NM_004453.2:c.250G>A
  • NM_004453.3:c.250G>A
  • Q16134:p.Ala84Thr
Protein change:
A23T; ALA84THR
Links:
UniProtKB: Q16134#VAR_075442; OMIM: 231675.0003; dbSNP: rs121964954
NCBI 1000 Genomes Browser:
rs121964954
Molecular consequence:
  • NM_001281737.2:c.109G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001281738.1:c.67G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_004453.4:c.250G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Glutaric acidemia IIc
Synonyms:
ETFDH deficiency
Identifiers:
MONDO: MONDO:0700076; MedGen: C3278156

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000033048OMIM
no assertion criteria provided
Pathogenic
(Dec 1, 2010)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

ETFDH mutations, CoQ10 levels, and respiratory chain activities in patients with riboflavin-responsive multiple acyl-CoA dehydrogenase deficiency.

Liang WC, Ohkuma A, Hayashi YK, López LC, Hirano M, Nonaka I, Noguchi S, Chen LH, Jong YJ, Nishino I.

Neuromuscul Disord. 2009 Mar;19(3):212-6. doi: 10.1016/j.nmd.2009.01.008. Epub 2009 Feb 26.

PubMed [citation]
PMID:
19249206
PMCID:
PMC10409523

High frequency of ETFDH c.250G>A mutation in Taiwanese patients with late-onset lipid storage myopathy.

Lan MY, Fu MH, Liu YF, Huang CC, Chang YY, Liu JS, Peng CH, Chen SS.

Clin Genet. 2010 Dec;78(6):565-9. doi: 10.1111/j.1399-0004.2010.01421.x.

PubMed [citation]
PMID:
20370797

Details of each submission

From OMIM, SCV000033048.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

In 4 Taiwanese patients from 3 unrelated families with glutaric acidemia IIC (MADD; 231680), Liang et al. (2009) identified a 250G-A transition in exon 3 of the ETFDH gene, resulting in an ala84-to-thr (A84T) substitution. One patient was homozygous for the mutation, whereas the other 3 were compound heterozygous for A84T and either a 524G-T transversion, resulting in an arg175-to-leu (R175L; 231675.0004) substitution (2 sibs) or a 380T-A transversion, resulting in a leu127-to-his (L127H; 231675.0005) substitution. All 3 mutations affected highly conserved residues in the FAD-binding domain. The R175L and L127H mutations were not identified in 200 Taiwanese control chromosomes. The A84T variant was identified in 1 of 200 Taiwanese control chromosomes but not in 100 Japanese, 100 Korean, and 100 Thai control chromosomes. No specific haplotype could be linked to the A84T variant.

Lan et al. (2010) identified homozygosity for the A84T mutation in 6 of 7 Han Taiwanese patients with MADD. The patients had a variable phenotype. The age at diagnosis ranged from 7 to 43 years, and the patients' ages at the time of the report were between 22 and 44 years. All had a history of episodic myalgia and limb weakness predominantly affecting the proximal muscles during an acute stage of myopathy. Four had dysphagia and 2 had respiratory failure. Serum creatine kinase was increased during the acute attacks. Three had 1 episode, whereas 4 had recurrent episodes. Four patients had extramuscular features. All except 1 regained normal muscle strength after the acute stage. Trigger factors in some patients included prolonged fasting and exercise. Blood analysis showed increased acylcarnitines ranging from C8 to C16. A seventh Han Taiwanese patient with the disorder was compound heterozygous for A84T and a 524G-A transition in the ETFDH gene, resulting in an arg175-to-his (R175H; 231675.0006) substitution in a highly conserved residue in the FAD-binding domain.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Mar 16, 2024