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NM_024529.4(CDC73):c.238-1G>A AND Hyperparathyroidism 2

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Feb 1, 2005
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000003440.3

Allele description

NM_024529.4(CDC73):c.238-1G>A

Gene:
CDC73:cell division cycle 73 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q31.2
Genomic location:
Preferred name:
NM_024529.4(CDC73):c.238-1G>A
HGVS:
  • NC_000001.11:g.193130173G>A
  • NG_012691.1:g.13216G>A
  • NM_024529.4:c.238-1G>A
  • LRG_507t1:c.238-1G>A
  • LRG_507:g.13216G>A
  • NC_000001.10:g.193099303G>A
Note:
NCBI staff reviewed the sequence information reported in PubMed 15613436 Fig. 2B to determine the location of this allele on the current reference sequence.
Nucleotide change:
IVS2AS, G-A, -1
Links:
OMIM: 607393.0013; dbSNP: rs587776559
NCBI 1000 Genomes Browser:
rs587776559
Molecular consequence:
  • NM_024529.4:c.238-1G>A - splice acceptor variant - [Sequence Ontology: SO:0001574]

Condition(s)

Name:
Hyperparathyroidism 2 (HRPT2)
Synonyms:
HYPERPARATHYROIDISM, FAMILIAL PRIMARY, WITH MULTIPLE OSSIFYING JAW FIBROMAS; HYPERPARATHYROIDISM-JAW TUMOR SYNDROME, HEREDITARY
Identifiers:
MedGen: C1704981; Orphanet: 99880; OMIM: 145001

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000023598OMIM
no assertion criteria provided
Pathogenic
(Feb 1, 2005)
unknownliterature only

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownnot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

A Novel IVS2-1G>A mutation causes aberrant splicing of the HRPT2 gene in a family with hyperparathyroidism-jaw tumor syndrome.

Moon SD, Park JH, Kim EM, Kim JH, Han JH, Yoo SJ, Yoon KH, Kang MI, Lee KW, Son HY, Kang SK, Oh SJ, Kim KM, Yoon SJ, Park JG, Kim IJ, Kang HC, Hong SW, Kim KR, Cha BY.

J Clin Endocrinol Metab. 2005 Feb;90(2):878-83. Epub 2004 Dec 21.

PubMed [citation]
PMID:
15613436

Details of each submission

From OMIM, SCV000023598.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (1)

Description

In a Korean family with HPT-JT syndrome (145001), Moon et al. (2005) identified a germline mutation in intron 2 of the HRPT2 gene, IVS2-1G-A. RT-PCR and sequencing of the transcripts revealed that this splicing mutation generated alternative splicing errors leading to the formation of 2 different transcripts, one with exon 3 deleted, the other lacking the first 23 bp of exon 3 due to the use of an internal splice acceptor in exon 3. Translation of both transcripts resulted in premature termination. In addition to this germline mutation, Moon et al. (2005) detected 2 somatic mutations of HRPT2 in malignant parathyroid tumors from the affected individuals. The proband carried a 1-bp deletion in exon 1, 85delG, that was predicted to cause premature termination of the protein (607393.0014). The proband's father carried an 18-bp in-frame deletion, 13_30delCTTAGCGTCCTGCGACAG, also in exon 1 (607393.0015). Moon et al. (2005) noted that to the time of their report, all inactivating somatic mutations in HRPT2 have occurred in exon 1.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownnot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jul 21, 2018