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NM_000226.4(KRT9):c.503T>C (p.Leu168Ser) AND Localized epidermolytic hyperkeratosis

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jul 30, 2003
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000003140.2

Allele description

NM_000226.4(KRT9):c.503T>C (p.Leu168Ser)

Gene:
KRT9:keratin 9 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17q21.2
Genomic location:
Preferred name:
NM_000226.4(KRT9):c.503T>C (p.Leu168Ser)
HGVS:
  • NC_000017.11:g.41571490A>G
  • NG_008300.2:g.5569T>C
  • NM_000226.4:c.503T>CMANE SELECT
  • NP_000217.2:p.Leu168Ser
  • NC_000017.10:g.39727742A>G
  • NG_008300.1:g.5569T>C
  • NM_000226.3:c.503T>C
  • P35527:p.Leu168Ser
Protein change:
L168S; LEU168SER
Links:
UniProtKB: P35527#VAR_003825; OMIM: 607606.0008; dbSNP: rs61157095
NCBI 1000 Genomes Browser:
rs61157095
Molecular consequence:
  • NM_000226.4:c.503T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Localized epidermolytic hyperkeratosis
Synonyms:
Epidermolytic palmoplantar keratoderma Vorner type; Unna-Thost disease, epidermolytic; Keratosis palmaris et plantaris familiaris; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0007758; MedGen: C1721006; OMIM: 144200; Human Phenotype Ontology: HP:0007559

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000023298OMIM
no assertion criteria provided
Pathogenic
(Jul 30, 2003)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

A novel mutation of keratin 9 in epidermolytic palmoplantar keratoderma combined with knuckle pads.

Lu Y, Guo C, Liu Q, Zhang X, Cheng L, Li J, Chen B, Gao G, Zhou H, Guo Y, Li Y, Gong Y.

Am J Med Genet A. 2003 Jul 30;120A(3):345-9.

PubMed [citation]
PMID:
12838553

Mutations in the 1A domain of keratin 9 in patients with epidermolytic palmoplantar keratoderma.

Rothnagel JA, Wojcik S, Liefer KM, Dominey AM, Huber M, Hohl D, Roop DR.

J Invest Dermatol. 1995 Mar;104(3):430-3.

PubMed [citation]
PMID:
7532199

Details of each submission

From OMIM, SCV000023298.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

The numbering of this KRT9 mutation (L168S) is based on the numbering system used by Lu et al. (2003). Early reports designated this mutation LEU167SER. The mutation has also been referred to as L15S.

Rothnagel et al. (1995) searched for mutations in the KRT9 gene in 6 unrelated patients with epidermolytic palmoplantar keratoderma (144200). In 2 of these, they found mutations that altered critical residues within the highly conserved helix initiation motif at the beginning of the rod domain of keratin 9. In a 3-generation Middle Eastern kindred, they found a C-to-T transition at codon 162 that resulted in an arginine to tryptophan substitution at position 10 of the 1A alpha-helical domain, thus confirming this codon as a hotspot for mutation in keratin 9 (see 607606.0001). The other mutation they found involved a T-to-C transition at codon 167 that resulted in the expression of a serine residue in place of the normal leucine at position 15 of the 1A segment.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jun 10, 2023