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NM_000552.4(VWF):c.4883T>C (p.Ile1628Thr) AND von Willebrand disease, type 2a

Germline classification:
Pathogenic (1 submission)
Last evaluated:
May 1, 2010
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000000308.2

Allele description

NM_000552.4(VWF):c.4883T>C (p.Ile1628Thr)

Gene:
VWF:von Willebrand factor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12p13.31
Genomic location:
Preferred name:
NM_000552.4(VWF):c.4883T>C (p.Ile1628Thr)
HGVS:
  • NC_000012.12:g.6018535A>G
  • NG_009072.1:g.111136T>C
  • NM_000552.4:c.4883T>C
  • NP_000543.2:p.Ile1628Thr
  • NC_000012.11:g.6127701A>G
  • NM_000552.2:c.4883T>C
  • NM_000552.3:c.4883T>C
  • P04275:p.Ile1628Thr
Protein change:
I1628T; ILE1628THR
Links:
UniProtKB: P04275#VAR_005817; OMIM: 613160.0001; dbSNP: rs61750584
NCBI 1000 Genomes Browser:
rs61750584
Molecular consequence:
  • NM_000552.4:c.4883T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
von Willebrand disease, type 2a (VWD2A)
Identifiers:
MONDO: MONDO:0015628; MedGen: C1282968

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000020452OMIM
no assertion criteria provided
Pathogenic
(May 1, 2010)
germlineliterature only

PubMed (3)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

The genetic basis of von Willebrand disease.

Goodeve AC.

Blood Rev. 2010 May;24(3):123-34. doi: 10.1016/j.blre.2010.03.003. Epub 2010 Apr 20. Review.

PubMed [citation]
PMID:
20409624

Analysis of the relationship of von Willebrand disease (vWD) and hereditary hemorrhagic telangiectasia and identification of a potential type IIA vWD mutation (IIe865 to Thr).

Iannuzzi MC, Hidaka N, Boehnke M, Bruck ME, Hanna WT, Collins FS, Ginsburg D.

Am J Hum Genet. 1991 Apr;48(4):757-63.

PubMed [citation]
PMID:
1673047
PMCID:
PMC1682950
See all PubMed Citations (3)

Details of each submission

From OMIM, SCV000020452.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (3)

Description

Goodeve (2010) noted that mutations in the VWF gene, which were sometimes numbered from the transcription start site of the mature protein, are now 'numbered from the first A of the ATG initiator methionine codon (A = +1) at the start of every protein (Met = +1), with cDNA rather than genomic DNA being commonly used as a reference sequence.' Thus, the mutation originally designated ILE865THR is now designated ILE1628THR (I1628T).

In affected members of a family with von Willebrand disease type 2A (see 613554), Iannuzzi et al. (1991) identified a 4883T-C transition in the VWF gene, resulting in an ile865-to-thr (I865T) substitution. Type 2A VWD is characterized by a qualitative defect in VWF, resulting in the absence of large and intermediate VWF multimers, which may be caused by increased VWF proteolysis. The I865T substitution was located immediately adjacent to 2 other previously identified mutations that also result in type 2A von Willebrand disease (R834W, 613160.0002 and V844D, 613160.0003), suggesting a clustering for these mutations in a portion of the protein critical for proteolysis.

Dent et al. (1990) noted that the I865T, R834W, and V844D mutations are located within a 32-amino acid segment in the midportion of the 2,813-amino acid VWF coding sequence. Type IIA von Willebrand disease is characterized by normal or only moderately decreased levels of von Willebrand factor, the absence of large and intermediate VWF multimers, and increased VWF proteolysis with an increase in the plasma levels of the 176-kD VWF proteolytic fragment. The proteolytic cleavage site is located between tyr842 and met843.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 18, 2020