1KOL


Conserved Protein Domain Family
fdhA_non_GSH

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TIGR02819: fdhA_non_GSH 
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formaldehyde dehydrogenase, glutathione-independent
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. [Central intermediary metabolism, One-carbon metabolism]
Statistics
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PSSM-Id: 274314
Aligned: 7 rows
Threshold Bit Score: 745.135
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1KOL_A           1 SGNRGVVYLGSGKVEVQKIDYPKMQDPRG---------KKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITG 71  Pseudomonas p...
CAB16062         7 TGNKAVVYKGKGTVAVEDIGYPELILRDGpgvpkanvnRKCEHGVILKVITTNICGSDQHMVRGRTTAPEGLVLGHEITG 86  Bacillus subt...
tigr:CPS_4039    5 HGNRGVVYTGPGSVEIQDIAYPKLAIGNR----------KCEHGVILKVVTTNICGSDQHMVRGRTTAEPGLVLGHEITG 74  Colwellia psy...
jgi:ReutB_4824   2 SSNRGVVYLGPGQVEVQKIDYPKMVDPSG---------RAIGHGVILKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITG 72  Ralstonia eut...
AAN65959         2 SGNRGVVYLGAGKVEVQKIDYPKMQDPRG---------KKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITG 72  Pseudomonas p...
WP_011690428     2 TGNKAVAYKGPGKVELIDIDYPSFELKDGpgvnpanvgRPVRHGVILKTVATNICGSDQHMVRGRTTAPTDLVLGHEITG 81  Arthrobacter ...
CAD72591         2 SDNKGVVYLGAGKVDVQSIDDPKLELSYRgk------tRQCHHGVILKVISTNICGSDQHMVRGRTTAPAGMVLGHEITG 75  Rhodopirellul...
1KOL_A          72 EVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKL 151 Pseudomonas p...
CAB16062        87 EVIETGRDVEFIKKGDIVSVPFNIACGRCVMCKTQKTHVCLNVNPDRPGSAYGYVDMGGWVGGQSEYVMVPYADFQLLVF 166 Bacillus subt...
tigr:CPS_4039   75 MIIEKGSDVEFLDIGDIVSVPFNIACGRCRNCREGNTGICLNVNPGRAGAAFGYVDMGGWVGGQSEYVMVPYADFNLLKF 154 Colwellia psy...
jgi:ReutB_4824  73 EVIEIGRDVETLKLGDLVSVPFNVACGRCAMCKEQHTGVCLTVNPSRAGGAYGYVDMGGWIGGQSEYVMVPYADFNLLRF 152 Ralstonia eut...
AAN65959        73 EIVEKGRDVERMQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKL 152 Pseudomonas p...
WP_011690428    82 EVVEVGPDVEFIKVGDICSVPFNIACGRCRNCKERKTGICLNVNPARPGAAYGYVDMGGWVGGQANYVLVPYADWNLLKF 161 Arthrobacter ...
CAD72591        76 EVIEVGRDVEFIKKGDICSVPFNIACGRCRCCKEGDTGVCENVNPDRPGAAYGYVDMGGWIGGQSRYVMVPYADWNLLAF 155 Rhodopirellul...
1KOL_A         152 PDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF 231 Pseudomonas p...
CAB16062       167 PDKEQALEKILDLTMLSDIFPTGFHGAYTAGVQTGSTVYIAGAGPVGLAAAHSAQLLGASTVIVGDLNEDRLAQARSFGC 246 Bacillus subt...
tigr:CPS_4039  155 PDKDQALEKIRDLTMLSDIFPTGYHGAVTAGVVPGATVYIAGAGPVGLAAAASSQLLGAACVIVGDMNPERLAQARSFGC 234 Colwellia psy...
jgi:ReutB_4824 153 PDRDQAMAKIRDLTCLSDILPTGYHGAVTAGVKPGSTVYIAGAGPVGMAAAASARLLGAACTIVGDMNPARLAHAKAMGF 232 Ralstonia eut...
AAN65959       153 PERDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAACVIVGDLNPARLAHAKSQGF 232 Pseudomonas p...
WP_011690428   162 PDRDQALEKMMDLAMLSDIFPTGFHGAVSAGVGVGSTVYIAGAGPVGLAAATSAHLLGAAVVIVGDLNADRLARARSFGC 241 Arthrobacter ...
CAD72591       156 PDRDQALAKIRDLTMLSDIFPTGYHGAYTAGVTTGSTVYVAGAGPVGLACAHAAQLLGAAVVIVGDMVEERLAQARSFGC 235 Rhodopirellul...
1KOL_A         232 EIADLsLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEgakHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVD 311 Pseudomonas p...
CAB16062       247 ETVNVqKHDRLGEQIEQILGEPTVDAAVDCVGFEASGHGNQ---GEAPAAVLNSIMDVTQVGGSLGIPGLYVTEDPGAKD 323 Bacillus subt...
tigr:CPS_4039  235 ETIDLrQDATVPDMIEQILGVPEVDAAVDCVGFEAHSHGCSh-hKEQPAIVLNTMMEVTRAGGGIGIPGLYVTGDPGAST 313 Colwellia psy...
jgi:ReutB_4824 233 EVVDLsKDATLGEQIAEILGTPEIDCAVDCVGFEAHGHGSSgyvEEAPATVLNSLMEITRPAGAIGIPGLYVTDDPGAQD 312 Ralstonia eut...
AAN65959       233 EVVDLsKDTPLHEQIVDILGEPEVDCAVDAVGFEARGHGHEgakHEAPATVLNSLMQVTRVAGNIGIPGLYVTEDPGAVD 312 Pseudomonas p...
WP_011690428   242 ETVDL-TEGGPAEQIEQILGVPEVDCGVDAVGFEAKGHGHDa--KEAPATVLNSLMELTAAGGALGIPGLYVTGDPGGID 318 Arthrobacter ...
CAD72591       236 ETVDLkTDASLPDMIEQILGSREVDCAVDCVGFEARGHGGDs-gVEKPATVLNQVMEVTRVGGGVGIPGLYVTDDPGGVD 314 Rhodopirellul...
1KOL_A         312 AAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVIDP 391 Pseudomonas p...
CAB16062       324 ADAKTGSLKIRFGLGWAKAHTFVTGQTPAMTYNRNLMKAILSGRAQIAKAVNATVISLDDAPKGYSDFDKGAAKKFVIDP 403 Bacillus subt...
tigr:CPS_4039  314 EAAKTGQLSMNFGLGWAKSHYFVTGQCPVMKYHRNLMQAILWDKVQIAKAVNVKVISLDGAPEGYNAFDKGAAQKFVIDP 393 Colwellia psy...
jgi:ReutB_4824 313 AAAQRGSLSIRFGLGWAKSHSFHTGQTPVLKYNRNLMQAILHNRLPIAEIVNVTVIPLDQAPEGYKQFDGGAPRKFVIDP 392 Ralstonia eut...
AAN65959       313 AAAKIGALSIRFGLGWAKSHSFHTGQTPTMKYNRQLMQAIMWDRINIAEVVGVQVINLDQAPEGYGEFDAGVPKKFVIDP 392 Pseudomonas p...
WP_011690428   319 EAAKKGALSLSLGTGWAKSLSFTTGQCPVMKYNRQLMMAILHDKVHIAKNVNAKAISLEDAPKGYAEFDAGAATKYVLNP 398 Arthrobacter ...
CAD72591       315 EAARTGNLSLRIGLGWAKSLHFTTGQCPVMKYNRGLMMAILHDRCQIAKAVNATVISLDDAPQGYADFDQGAAKKFVLDP 394 Rhodopirellul...
1KOL_A         392 HKT 394 Pseudomonas putida
CAB16062       404 HGT 406 Bacillus subtilis subsp. subtilis str. 168
tigr:CPS_4039  394 HSM 396 Colwellia psychrerythraea 34H
jgi:ReutB_4824 393 HGL 395 Ralstonia eutropha JMP134
AAN65959       393 HKM 395 Pseudomonas putida KT2440
WP_011690428   399 NGY 401 Arthrobacter sp. FB24
CAD72591       395 HGV 397 Rhodopirellula baltica SH 1
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