Conserved Protein Domain Family
TolC

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COG1538: TolC (this model, PSSM-Id:224455 is obsolete and has been replaced by 441147)
Outer membrane protein TolC [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 224455
Aligned: 113 rows
Threshold Bit Score: 102.558
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16125267   1 MRVLSKvLSVRTSLIALA---MAMAVVGRADLAHA-ETLAEAITAAYQ---SNPNIQAQRAAMRALDENYT--------Q 65  Caulobacter crescen...
19703852  10 MMEGLKeKEISTENLKREkegMLSLDECIDLALKN-NSQIKLKEIEAKiakIDKNISFGNFLPRISAMYSIse----ldR 84  Fusobacterium nucle...
19704608   1 ------------------------------------MTNIVLARDLTLeqaIDLSLNNSKEMRISEKNLDIskl--nvsK 42  Fusobacterium nucle...
15646098  57 VLSNHE-GLHAQEYAIKRa--SKMKLAAKLSFLPQ-IDLSAFYVYLSNpikMDFASQKQPGVQKATNQIHQgiqniqqnI 132 Helicobacter pylori...
15641614  11 CSILFMpIAHAAPLSFQEawdLLQQQNNSLAAQRAnVERYAHLKDATQn-lNLPSVSVGANFTRLDQDVTLsgk--qivD 87  Vibrio cholerae
15606342   1 ----MWiILLIPTLLFSLg--LQELWKSALKKNP------EILAQKQDiraKEYKLKATKNLYFPLFEAQYsr----awL 64  Aquifex aeolicus
15606392   1 -----------------------MHFLIFVLISLN------FVFSSQLeelINFALKNNTKLKSFVYLEKAnt----frS 47  Aquifex aeolicus
15606535   1 ---------------------MSGEMRVIWVILFL----FTFSFPLTLeeaVSIALKNVTDVKLSRYELKKldy--eikK 53  Aquifex aeolicus
15606101   1 -MVLIG-FLLLVGLSFAAe--lPLKVFIKDALQNN----LELSSQRREvkaSEYEYKSVRGLLFPTVKLEEty----tkT 68  Aquifex aeolicus
15612447  57 VLSNHE-GLHAQEYAIKRa--SKMKLAAKLSFLPQ-IDLSAFYVYLSNpikMDFASQKQAGVQKATNQIHQglqniqqnI 132 Helicobacter pylori...
16125267  66 ARSAYGLQASASVAEVYG---WSKGVNAKNG------VEAASQTSTLSL-SQSLYT--NGR-FSARLAGVEAQIKAAREN 132 Caulobacter crescen...
19703852  85 YVSTTIPAPDVTLGILGGi-tLPSLPATLTSr--------MVDKDFKNYaLTAQLPi-FVPaTWFLYSAREKGENISLYT 154 Fusobacterium nucle...
19704608  43 AFKNALPSVTYTGAYTVGe--HERKILTQSEr------NyVNKKRGYTQnIKLTQPlfTGGtITAGIKGAKAYENIASYS 114 Fusobacterium nucle...
15646098 133 PSQVLTPQIQAGMQGv----mQGFGALSSTLeapllfSKQNVVIGALSI-IYPLYMg-GAR--FTMVRIADLMQKDANEV 204 Helicobacter pylori...
15641614  88 SAGGIDPNLIASLSPSLLplvTHLGAAKSTIt--------ERDIFTSSIrAIWPIFt-GGR-ITAAQDAAAGKEEEAQSQ 157 Vibrio cholerae
15606342  65 SEKQKLEVFPFSFDm------TKK----------------NYENYSISL-KELLYD--FGR-REKLIDISVKELKVSQYF 118 Aquifex aeolicus
15606392  48 LFMKSLPNPEIRFTFRNf---DTEVPMVRE----------ENPMSGYAItFMQRYTlpVKR--EKSSEIFKNRAKEVKVK 112 Aquifex aeolicus
15606535  54 ALSGILPKVTGSYSYLR----LDDSLVYG-----------FALRDRQSYdITLSQTi-FNKaIFDSISLAKSQKELQNLI 117 Aquifex aeolicus
15606101  69 DISSYYLFTKLNQERi----tLQDFTPSKLNd--------PGSIQNFETkLTLEIPiwMGGkLRAFKNMAKNKWKGDKTI 136 Aquifex aeolicus
15612447 133 PPQVLTPQIQAGIQGv----mQGFGALSSTLeapllfSKQNVVIGALSI-IYPLYMg-GAR--FTMVRIADLMQKDANEV 204 Helicobacter pylori...
16125267 133 LRRIEMDLLVRVTNAYISVRRDREILRISQGGEAWLQKQLKDTEDKYSVRQVTLTDVQQAKAR--LASASTQVANAQAQL 210 Caulobacter crescen...
19703852 155 EDLTKKMIKLKVISEYYYILALESEKRVLESEYEYAKNLNKNANLALEAESILKWQEEQTELL--IKQKENAIKNNKRDL 232 Fusobacterium nucle...
19704608 115 FLQSKIKNRLDTIKIFSDIINAQRNLEALSYSEGILLKRYQKQEEQLKLRLITKTDVLQTEYS--IEDIKAQMINIKNII 192 Fusobacterium nucle...
15646098 205 YRLKKLSTFQELVSVYYGMVLNAEVAETLEEVEKGHYKHFQNALKMQKVG--QIARVETLGAQvaYDKAHIASVKAKDVL 282 Helicobacter pylori...
15641614 158 LAMEIQARYEDLAKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKLEQQGQIAHVERLQADAS--LDKAKVERKKAQKTL 235 Vibrio cholerae
15606342 119 YEEKKQEILYKVAENYFNVLSVKGKIRIYEEELKAVKSQYQLAKAYYEKGLVAITDLLQAKVR--IHEVKEKIRKEKGNL 196 Aquifex aeolicus
15606392 113 REIYERELIKNVKILYYDFLYTYEKERILKEIKEDLYILLENLKEKYAQNKALLSDILMVKTE--IIKVEEELKNNEALR 190 Aquifex aeolicus
15606535 118 LEDVKREVVYRVKDMYYAILYKWTVVELKKENLKYWEEYLKTVEEKYKAGILPKVEYVRAKAQ--FENAKAELAQARADY 195 Aquifex aeolicus
15606101 137 YGRKEEEVILKVYEAYANAVLAKNAVEVAKQAVKDAEEHVRLAEKAYKTGVALFADVLRAKVY--LSKAKEKLVQAQNNY 214 Aquifex aeolicus
15612447 205 YRLKKLSTFQELVSVYYGMVLNAEVAETLEEVEKGHYKHFQNALKMQKVG--QIARVETLGAQvaYDKAHIASVKAKDVL 282 Helicobacter pylori...
16125267 211 NVSVAFYASLVGRQPE--TLEPEPD-IDGLPT--TLDE-AFNQAEQANPVLLAAGYTEKASRAGVAEARAQRLFSVGARA 284 Caulobacter crescen...
19703852 233 QIAKMNLMNDLGLDLNtdFRFVIPEd--TVYKl-pPLEdVVYDALINSELIKISHNVVAISKDKIKIAMSSFLPQISLGG 309 Fusobacterium nucle...
19704608 193 DTNMEKLYIRTGISKSepLNLVPFDi-PNNFSekINLDsDLKQAINESISAKIAEEQVKVASATKMAAVGDLLPQVSAFA 271 Fusobacterium nucle...
15646098 283 EVSQLSFNSILSSKDDl-VPSSKLEiRTEKNLp-DLSF-FVSSTLNSYPVLKTLENQIQISKENTKLQIAKFLPQVSFFG 359 Helicobacter pylori...
15641614 236 DIAQSALTQILGATETvePSGMLFIn--TSLP---PMHaFIEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYPEVYLYG 310 Vibrio cholerae
15606342 197 ETLLVNLSNLTGIEKEklRNIQEIEgIPEIKD----LSyYLKTAYERRGILKAQKEKVKILENLARIKALEYAPQIFGGL 272 Aquifex aeolicus
15606392 191 EKIKGEIYSLIGGKFDlrPGRLSLFk--------FPQN----FSEDESVYVRLLFEELNTLRKELERAKVEHYPDLNLLA 258 Aquifex aeolicus
15606535 196 EKSIENFKAFLKLEKTpeFMGKLEVn---LNEd-FSEEkLLEFLEKNNSTLKVAKARIEVAKKTYNLSKADYYPTLDAYL 271 Aquifex aeolicus
15606101 215 EVAKKALELLTNKNYGefDVKDFSKc----PS--VKVEeLKSKALNHREDYLALKYYIKSLKEGQKSALGDILPQVFAFA 288 Aquifex aeolicus
15612447 283 EVSQLSFNSILSSKDDl-APSGKLEiHTEKNLp-DLSF-FVSSTLNSYPVLKTLENQIQISKENTKLQIAKFLPQVSFFG 359 Helicobacter pylori...
16125267 285 DYRNGSSTPY-Y---ARGG-LREDTVNAsiTLTQPLFT-SGQLNASVRQSIEENNRDKLLMEDARRSMVLSVSQYWDSLV 358 Caulobacter crescen...
19703852 310 GVIGTGLSFLn---------PQNILFGAv-TGFLSLFN-GFKNVNEYKKAKLQSEAAYIQREDVIMNTIISAVNSYNNVQ 378 Fusobacterium nucle...
19704608 272 SYGTGERTTF-----ERSYkDSEWTGGV--QVSWKVFS-FGSDLDNYRVAKLQEEQEELKETSTKENIEINVRSAYLNVL 343 Fusobacterium nucle...
15646098 360 SYIMKQNNSVfedmiPS------WFVGV--AGRMPILS-PTGRIQKYQASKLAELQVSSEQIQAKKNMELLVNKTYKETL 430 Helicobacter pylori...
15641614 311 DYSLHEDDSL------ASQmKPDWLVGVg--VNIPLIEnSGR-SEQVKAANSAVNQVRYLKAQAKQDLSVLVEKTYLEAE 381 Vibrio cholerae
15606342 273 TYYYTNQNPN-----VEPKgLFSYYVGA--TLSFQTLK----PYYEHLSLKREKIKALKELESLENSIKLQVKSAYEDVL 341 Aquifex aeolicus
15606392 259 EYVVRTGNPD------------LFSLGIg--VSLPVWY-EKRERFLVLEAKERIKAKMKELNFTKNFVKERFLGLKRSYN 323 Aquifex aeolicus
15606535 272 TYEGYTTRKSlF---GGKEwVKGYTFGI--SLNYKFFD-GFAREAEVAQRKVDIFQEKERFKDTFFNVKRDLKNALLEIK 345 Aquifex aeolicus
15606101 289 NYSMYDENTP-----FGSQ-GEGYMLGVg--LKWNFNT-GLSPIYKKKSFKEKELALKRKRELLAKAIMFEIDKAFAEYE 359 Aquifex aeolicus
15612447 360 SYLMKQNNSVfedmiPN------WFVGV--AGRMPILS-PTGRIQKYQASKLAELQVNSEQIQAKKNMELLVNKTYKETL 430 Helicobacter pylori...
16125267 359 AARKSLVSLEEEMKANTIAFYGVREEERFALRSTIEVLNAQAELQNAQINFVRGRANEYVGRLHLLAQVGTLEVGNLAPG 438 Caulobacter crescen...
19703852 379 KSIEDKELADMNYNIAEQKFKQKKLENEVGNITDTDLLNEMTELEKATSLKEKADYKYSVSIEALKMLIEK--------- 449 Fusobacterium nucle...
19704608 344 SLEKQIASQGKTLEVAKVNFELNQEKYDAGLISTVDYLDFENTYRQARIAYNKVLLDYYYAFETYRSLLI---------- 413 Fusobacterium nucle...
15646098 431 SYLKEYKSLLSSVELAKENLKLQEQAFLQGLSTNAQVIDARNTLSSIVVEQKSVAYKYIVSLANLMALSDH-IDLFYEFV 509 Helicobacter pylori...
15641614 382 QALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSLASFNYLISLNKLLALSSEMSSFSTYHQ 461 Vibrio cholerae
15606342 342 TAKENLKTAKERLKFAKKYYELALEQYKNQLISQTDLLIAEATLTSAKEALLIAKNELWKAYYRLLWASSLLEVER---- 417 Aquifex aeolicus
15606392 324 ITLKALKTLEEEIKKKEQEIEALFLAYGYEKVDVREIIRAYRDLWKLKIQRAFTLKKLNEISAEAEALI----------- 392 Aquifex aeolicus
15606535 346 SLKERIKAVKLSLEAAKETLKLATERHKEGIGTYLEVLDARRNYNDTLDTLHFLTYRYMSTLALIERLTR---------- 415 Aquifex aeolicus
15606101 360 NALKTLESAKSRKEEAKEVLRVIEKRYEVGMARMVDLLDAQTQLDMARFEYAKALRDCNVAYAKALFSAGLLKEEVLK-- 437 Aquifex aeolicus
15612447 431 SYLKEYKSLLSSVELAKENLKLQEQAFLQGLSTNAQVIDARNTLSSIIVEQKSVAYKYIVSLANLMALSDH-IDLFYEFV 509 Helicobacter pylori...
16125267 439 VQPY 442 Caulobacter crescentus CB15
19703852     ----     Fusobacterium nucleatum subsp. nucleatum ATCC 25586
19704608     ----     Fusobacterium nucleatum subsp. nucleatum ATCC 25586
15646098 510 Y--- 510 Helicobacter pylori 26695
15641614 462 SAVA 465 Vibrio cholerae
15606342     ----     Aquifex aeolicus
15606392     ----     Aquifex aeolicus
15606535     ----     Aquifex aeolicus
15606101     ----     Aquifex aeolicus
15612447 510 Y--- 510 Helicobacter pylori J99
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