Conserved Protein Domain Family
DUF5528

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pfam17666: DUF5528 (this model, PSSM-Id:407562 is obsolete and has been replaced by 465447)
Family of unknown function (DUF5528)
This is a family of unknown function found in Chordata.
Statistics
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PSSM-Id: 407562
Aligned: 12 rows
Threshold Bit Score: 247.414
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ELK18678      20 TQQPRPSVTWDLSSSTASDSTAQATTSLR-----------T---YPASAFFHRDRLGSRPDIrAVGTQPQICFLRPRMAR 85  black flying fox
XP_003365535  20 TQQARPSVTWNLGLSTASADAAQASTSSG-----------T---NPASAFFRRSRVASRPEV-NVGARPQICFLRPRTTQ 84  horse
XP_003419185  24 GQSSRPSVTWNLNSPVAYATAAQAATGSW-----------S---ARPSAVFGLDTQSSHKGV-CVGARPQICFLRPRTAQ 88  African savanna...
XP_019833627  23 GQQLRPSVTWNLDSPVAGAVAPQATSSSG-----------T---YPASAFFRHSRLSNRRDT-HVGSQPKICFLRPRTAQ 87  zebu cattle
1_pfamImport   1 GQQLR-SVTWNLDSPTAGAGTRGSRALRL-----------LlprQPRGSWSWLSRTLGASEP-GLFLDP------RRTCP 61 
XP_020929344  23 SQQPRPSVTWNLGSPSAYTAAAQVTTSSG-----------T---SPASAFFWRSRLGSHPEI-HLGSQPKICFLRPRTAR 87  pig
ELW66544      20 TQPTRPSVTWDLRSSTDYGPAVQASTGSR-----------A---SRGSLFFRRDR--------GLGVQPQICFLRPRSTQ 77  Chinese tree shrew
XP_008982293  20 TQPTKPLVSWDLGSSKIYPTAAQATTSCG-----------A---TL-GLNHLRDRLGRRQEI-GLGSQPQISFPRPRSAQ 83  white-tufted-ea...
XP_003819041   2 TQPTRPSVTCDQGSSTIGGTAAQATTSSS-----------A---TS-GSNYQRDRLGRRPEI-GVGGQPQICFPRPRSAQ 65  pygmy chimpanzee
NP_001100703  18 TQPKRPSVKWDLGSDYEDVSNETTAS---------------------GSDFRRQRTASQPDI-GLHVQPQIYFLRPRSPI 75  Norway rat
XP_002719755  20 TQPVR--VTWDLAPSEDCEAAAQATPGPS-----------T----PRGPELRRDRFGSRAEL-VLGVHPQLYFLPPRAPQ 81  rabbit
XP_013221440  17 ARPTRPSVTWDLDLYKDYKSSSKATASSGatgnldlrrdqH---------------GDRQET-GHGVQPKVYFLRPRTSQ 80  thirteen-lined ...
ELK18678      86 PLVLFSLMNSSEAAVTKFLPKSHLSRVIIRDNLSAQRIYEMETKASDKTKKKMSYLYDHLKKKFMTDQLRKLGNWKRESM 165 black flying fox
XP_003365535  85 PLVFFSLMNSSEAAMRNFLPKSHLSRVITRDNLCAQRIYEMEIRASDKTKKKMSHLYDHLKKKFMTDQLRKLGRWRRESM 164 horse
XP_003419185  89 TPVLYSLMNSSEAATTKFLPKSHLSRVIIRDNLSAQRIFEMEVKASDKTKKKMSHLYDHLKKKFMTDQLRKLGRWRRESL 168 African savanna...
XP_019833627  88 PLVLFSLMNSSEAAVKKFLPKSHLSRVIIRDNLSAQRIYEMEIRAADKTKKKMNHLYDHLKKKFMTDQLRKLGRWRREST 167 zebu cattle
1_pfamImport  62 PHTLWILMNSSEAAMKKFLPKSHLSRVIIRDNLSAQRIYEMEIRAADKTKKKMNHLYDHLKKKFMTDQLRKLGRWRREST 141
XP_020929344  88 PPVLFSLMNSSEAAVKKFLPKSHLSRVIIRDNLSAQRIYEMEVKASDKTKKKMGHLYDHLKKKFMTDQLRKLGRWRRESM 167 pig
ELW66544      78 SPVFFSIMNSSEAAVKKFLPKSHLSRVIIRDNLSAQRIYEMEIRASEKTKKKMGHLYDHLKKKFMTDQLRKLGRWRRESL 157 Chinese tree shrew
XP_008982293  84 PPVLFSVMNSSEAAVKKLLPKSNLSRVIIHDNRIAQRIYEMEVSTLEKTKKKISHYYEHLKKKFMTEQLRKLGRWRQEST 163 white-tufted-ea...
XP_003819041  66 QPVLFSLMNSSEAAMKKTLPKSHLSRVIIHDNRIAQRIYEMEVSALEKTKKKISHYYEHLKKKFMTEQLRKLGRWREESV 145 pygmy chimpanzee
NP_001100703  76 PKLLFSLINTSDANVKKMLPKSHLSRVIIRDNLNAQRIYEMEMKASDKTKRKMSYLYDHLKKKFMTDQLRKMMRWRRDSM 155 Norway rat
XP_002719755  82 PLVLVSVTNSSEAAVKRFLPKNHLSRVIIRDNLSAQRICEVEIRASEKTKKKMSHLHDHLKKKFMLEQLQKLGRWRRESM 161 rabbit
XP_013221440  81 PSVFFSLMDSSEAALSKFLPKSHLSRVIIRDNLSVQRIYETEIRASDKTKKKMSHLYDHLKKKFLTDQLRKLGRWRQESM 160 thirteen-lined ...
ELK18678     166 NLRQYLN 172 black flying fox
XP_003365535 165 NVQQYLD 171 horse
XP_003419185 169 NLQRYLD 175 African savanna elephant
XP_019833627 168 NIRQYLD 174 zebu cattle
1_pfamImport 142 NIRQYLD 148
XP_020929344 168 NIRQYLD 174 pig
ELW66544     158 GIQQYLD 164 Chinese tree shrew
XP_008982293 164 TINQYLP 170 white-tufted-ear marmoset
XP_003819041 146 NSDRYLT 152 pygmy chimpanzee
NP_001100703 156 STQQYLD 162 Norway rat
XP_002719755 162 SIRQYLY 168 rabbit
XP_013221440 161 NIQQYLD 167 thirteen-lined ground squirrel
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