Conserved Protein Domain Family
MMTV_SAg
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pfam01054: MMTV_SAg 
Mouse mammary tumour virus superantigen
The mouse mammary tumour virus (MMTV) is a milk-transmitted type B retrovirus. The superantigen (SAg) is encoded by the long terminal repeat. The SAgs are also called PR73.
Links
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Statistics
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PSSM-Id: 366439
Aligned: 3 rows
Threshold Bit Score: 206.161
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P03319    52 LGIALLClgllgevavrarraltlDSFNSSSVQDYNLNNSENSTFLLrQGPQPTSSYKPHRFCPSEIEirmlaknyiftn 131 Mouse mammary tumor...
Q00997    25 LCLALPT-----------------DSKPISTTEAPILNITQSPSLNI-SSPSTLEPSEPLKNCTTFLD------------ 74  Herpesvirus saimiri...
EGW08080   2 LNSAPPFikaf---------aevaSSGNKGSSLGQFLDAVEQKELLMqGDP-----VDP--------------------- 46 

P03319   132 ktnpigrlLVTMLRNESLSFSTIFTQIQKLE----MGIENRKRRSTSIEEQvqGLL--TTGLEVKKGKKSVFVKIGDRWW 205 Mouse mammary tumor...
Q00997    75 --------LLWQRLGENASIKDLMLTLQREEvhgrMTTLPSPRPSSKVEEQ--QLQrpRNLLPTAVGPPHVKYRLYNRLW 144 Herpesvirus saimiri...
EGW08080  47 ---------------------------EKIKveqlIGNEKSETKGSA-EEQlrKLAipTRHLPGG----YIQYKIRDRWW 94 

P03319   206 QP---GTYRGPYIyRPTDAPLPYTGRYDLNWDRWVTVNGYKVLYRSLPFRERLA 256 Mouse mammary tumor virus (STRAIN C3H)
Q00997   145 EApkgADVNGKPI-QFDDPPLPYTGAYNDDGVLMVNINGKHVRFDSLSYWERIK 197 Herpesvirus saimiri (strain 11)
EGW08080  95 APpqwTKQSGNYL-----DPLPYTGGYDELGNRWVNHEGKKTTLERLAFPGKIS 143
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