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gene
GeneReviews
PagonRoberta A
BirdThomas C
DolanCynthia R
SmithRichard JH
StephensKaren
University of Washington, Seattle2009
geneticspublic health

GeneReviews designates a molecular genetic test as clinically available only if the test is listed in the GeneTests Laboratory Directory by either a US CLIA-licensed laboratory or a non-US clinical laboratory. GeneTests does not verify laboratory-submitted information or warrant any aspect of a laboratory's licensure or performance. Clinicians must communicate directly with the laboratories to verify information.—ED.

Genetics clinics, staffed by genetics professionals, provide information for individuals and families regarding the natural history, treatment, mode of inheritance, and genetic risks to other family members as well as information about available consumer-oriented resources. See the GeneTests Clinic Directory.

For current information on availability of genetic testing for disorders included in this section, see GeneTests Laboratory Directory. —ED.

Genetic counseling is the process of providing individuals and families with information on the nature, inheritance, and implications of genetic disorders to help them make informed medical and personal decisions. The following section deals with genetic risk assessment and the use of family history and genetic testing to clarify genetic status for family members. This section is not meant to address all personal, cultural, or ethical issues that individuals may face or to substitute for consultation with a genetics professional. To find a genetics or prenatal diagnosis clinic, see the GeneTests Clinic Directory.

Tuberous Sclerosis Complex
[Bourneville Disease. Includes: Tuberous Sclerosis 1 (TSC1), Tuberous Sclerosis 2 (TSC2)]

Hope Northrup, MD, FACMG
Department of Pediatrics
Division of Medical Genetics
University of Texas Medical School
Houston
Kit Sing Au, PhD
Department of Pediatrics
Division of Medical Genetics
University of Texas Medical School
Houston
07052009tuberous-sclerosis
Initial Posting: July 13, 1999.
Last Update: May 7, 2009.

Summary

Disease characteristics. Tuberous sclerosis complex (TSC) involves abnormalities of the skin (hypomelanotic macules, facial angiofibromas, shagreen patches, fibrous facial plaques, ungual fibromas), brain (cortical tubers, subependymal nodules, seizures, mental retardation/developmental delay), kidney (angiomyolipomas, cysts), and heart (rhabdomyomas, arrhythmias). CNS tumors are the leading cause of morbidity and mortality; renal disease is the second leading cause of early death.

Diagnosis/testing. The diagnosis of TSC is based on clinical findings. Two causative genes, TSC1 and TSC2, have been identified. Molecular testing for both genes is available on a clinical basis.

Management. Treatment of manifestations: For seizures: vigabatrin and other antiepileptic drugs, and on occasion, epilepsy surgery. Removal of enlarging giant cell astrocytomas before symptoms develop and/or they become locally invasive. Renal arterial embolization or renal sparing surgery for angiomyolipomas greater than 3.5 to 4.0 cm. Surveillance: cranial CT/MRI every one to three years for children and adolescents; semiannual renal sonography in individuals with small angiomyolipomas, otherwise renal ultrasonography every one to three years; renal CT/MRI if large or numerous tumors are detected; neurodevelopmental and behavioral evaluations at the time of school entry and in response to educational or behavioral concerns in children; echocardiography, if cardiac symptoms indicate; chest CT, if pulmonary symptoms indicate. Testing of relatives at risk: Identifying affected relatives permits monitoring for early detection of problems associated with TSC, thus leading to earlier treatment and better outcomes.

Genetic counseling. TSC is inherited in an autosomal dominant manner. Two-thirds of affected individuals have TSC as the result of a de novo mutation. The offspring of an affected individual have a 50% risk of inheriting the TSC-causing mutation. Prenatal testing for pregnancies at increased risk is possible if the disease-causing mutation has been identified in the family.

Diagnosis

Clinical Diagnosis

The diagnostic criteria for tuberous sclerosis complex (TSC) have been revised [Roach & Sparagana 2004]. The new criteria:

  • Recognize that individuals with isolated lymphangioleiomyomatosis (LAM) who have associated renal angiomyolipomas do not have TSC [Smolarek et al 1998];

  • Have eliminated nonspecific features (e.g., infantile spasms and myoclonic, tonic, or atonic seizures) and have made certain features more specific (e.g., nontraumatic ungual or periungual fibroma; three or more hypomelanotic macules).

Definite TSC. Two major features or one major feature plus two minor features

Probable TSC. One major feature plus one minor feature

Possible TSC. One major feature or two or more minor features

Major Features

  • Facial angiofibromas or forehead plaque

  • Nontraumatic ungual or periungual fibromas

  • Hypomelanotic macules (three or more)

  • Shagreen patch (connective tissue nevus)

  • Multiple retinal nodular hamartomas

  • Cortical tuber 1

  • Subependymal nodule

  • Subependymal giant cell astrocytoma

  • Cardiac rhabdomyoma, single or multiple

  • Lymphangiomyomatosis 2

  • Renal angiomyolipoma 2

Minor Features

  • Multiple randomly distributed pits in dental enamel

  • Hamartomatous rectal polyps 4

  • Bone cysts 5

  • Cerebral white matter radial migration lines 1, 3, 5

  • Gingival fibromas

  • Nonrenal hamartoma 4

  • Retinal achromic patch

  • "Confetti" skin lesions

  • Multiple renal cysts 4

1. Cerebral cortical dysplasia and cerebral white matter migration tracts occurring together are counted as one rather than two features of TSC.

2. When both lymphangiomyomatosis and renal angiomyolipomas are present, other features of tuberous sclerosis must be present in order for TSC to be diagnosed.

3. White matter migration lines and focal cortical dysplasia are often seen in individuals with TSC; however, because these lesions can be seen independently and are relatively nonspecific, they are considered a minor diagnostic criterion for TSC [Roach & Sparagana 2004].

4. Histologic confirmation is suggested.

5. Radiographic confirmation is sufficient.

Molecular Genetic Testing

GeneReviews designates a molecular genetic test as clinically available only if the test is listed in the GeneTests Laboratory Directory by either a US CLIA-licensed laboratory or a non-US clinical laboratory. GeneTests does not verify laboratory-submitted information or warrant any aspect of a laboratory's licensure or performance. Clinicians must communicate directly with the laboratories to verify information.—ED.

Genes. The only two genes known to be associated with tuberous sclerosis complex are TSC1 and TSC2 [European Chromosome 16 Tuberous Sclerosis Consortium 1993, van Slegtenhorst et al 1997].

Since the identification of the TSC2 and TSC1 genes, more than 1500 individuals with TSC and their families have had disease-causing mutations identified [Jones et al 1999, Dabora et al 2001, Au et al 2004, Sancak et al 2005, Au et al 2007]. Of all probands in whom mutations were identified, 27% had mutations in TSC1 and 73% had mutations in TSC2.

Clinical testing. Molecular genetic testing of the TSC1 and TSC2 genes is complicated by the large size of the two genes, the large number of disease-causing mutations, and the high rate of somatic mosaicism (10%-25%) [Sampson et al 1997, Verhoef et al 1999].

Table 1 summarizes molecular genetic testing for this disorder.

Table 1. Molecular Genetic Testing Used in Tuberous Sclerosis Complex

Gene Symbol% of TSC Attributed to Mutations in This Gene 1Test
Method
Mutation Detection Frequency by Gene, Family History, and Test MethodTest Availability
Familial CasesSimplex Cases 2
TSC1~19%Sequence analysis~30%~15%Clinical graphic element
Deletion/ duplication analysis 30~0.5%
TSC2~60%Sequence analysis50%~60%-70%Clinical graphic element
Deletion/ duplication analysis 3~0.5%~5%

1. ~20% of individuals with TSC do not have an identifiable mutation and thus cannot be classified by genetic subtype.

2. Simplex case = single occurrence in a family

3. Testing that detects deletions/duplications not readily detectable by sequence analysis of genomic DNA; a variety of methods including quantitative PCR, real-time PCR, multiplex ligation dependent probe amplification (MLPA), or array CGH may be used.

Interpretation of test results

Testing Strategy

Confirmation of the diagnosis in a proband can be accomplished with:

Predictive testing for at-risk asymptomatic family members requires prior identification of the disease-causing mutation in the family.

Prenatal diagnosis/ preimplantation genetic diagnosis (PGD) for at-risk pregnancies require prior identification of the disease-causing mutation in the family.

Clinical Description

Natural History

Tuberous sclerosis complex (TSC) exhibits variability in clinical findings both among and within families. Females tend to have milder disease than males [Sancak et al 2005, Au et al 2007]. Any organ system can be involved in TSC.

Skin. The skin is affected in virtually 100% of individuals with TSC. Skin lesions include: hypomelanotic macules (87%-100% of individuals), facial angiofibromas (47%-90%), shagreen patches (20%-80%), fibrous facial plaques, and ungual fibromas (17%-87%). Among the skin lesions, the facial angiofibromas cause the most disfigurement. None of the skin lesions results in serious medical problems.

Central nervous system. CNS tumors are the leading cause of morbidity and mortality in TSC. The brain lesions of TSC, which include subependymal glial nodules [Torres et al 1998], cortical tubers, and subependymal giant cell astrocytomas, can be distinguished with neuroimaging studies. Subependymal glial nodules occur in 90% of individuals and cortical or subcortical tubers in 70%. Goodman et al [1997] have suggested that the cortical tuber count detected on MRI may be a marker to predict the severity of cerebral dysfunction. They found moderately to severely affected individuals to be five times more likely to have more than seven cortical tubers detected on MRI than those more mildly affected. Subependymal giant cell astrocytomas occur in 6% to 14% of all individuals with TSC [Torres et al 1998]. These giant cell astrocytomas may enlarge, causing pressure and obstruction and resulting in significant morbidity and mortality.

More than 80% of individuals with TSC have been reported to have seizures, although this percentage may reflect ascertainment bias of more severely involved individuals. TSC is a known cause of the infantile spasm/hypsarrhythmia syndrome. At least 50% of individuals have developmental delay or mental retardation. The leading cause of premature death (32.5%) among individuals with TSC is a complication of severe mental retardation (e.g., status epilepticus and bronchopneumonia).

Individuals with TSC have a great risk of neurodevelopmental and behavioral impairment. The behavioral and psychiatric disorders common in TSC include pervasive developmental disorder (PDD) and autism. Two recent literature reviews [Curatolo et al 2004, Wiznitzer 2004] suggest that about 25% of individuals with TSC have autism and 40%-50% meet diagnostic criteria within the autistic spectrum disorders depending on diagnostic tools used. Hyperactivity or attention deficit hyperactivity disorder (ADHD) and aggression are also commonly observed in TSC [Baker et al 1998, Gutierrez et al 1998]. Prather & de Vries [2004] observed that the frontal brain systems most consistently disrupted by TSC-related neuropathology lead to abnormalities in regulatory and goal-directed behaviors. Zaroff et al [2004] reported that early-onset seizures and increased tuber burden are risk factors for cognitive impairment, and that early behavioral assessment and therapeutic intervention, including seizure control, promote better neurobehavioral outcome.

Kidneys. Renal disease is the second leading cause of early death (27.5%) in individuals with TSC. An estimated 80% of children with TSC have an identifiable renal lesion by the mean age of 10.5 years [Ewalt et al 1998]. Five different renal lesions occur in TSC: benign angiomyolipoma (70% of affected individuals), epithelial cysts (20%-30%) [Sancak et al 2005, Au et al 2007], oncocytoma (benign adenomatous hamartoma) (<1%), malignant angiomyolipoma (<1%), and renal cell carcinoma (<3%) [Patel et al 2005].

Benign angiomyolipomas comprise abnormal blood vessels, sheets of smooth muscle, and mature adipose tissue. In children, angiomyolipomas tend to increase in size or number over time. Benign angiomyolipomas can cause life-threatening bleeding and can replace renal parenchyma, leading to end-stage renal disease (ESRD).

Renal cysts have an epithelial lining of hypertrophic hyperplastic eosinophilic cells.

Some affected individuals have features of both TSC2 and autosomal dominant polycystic kidney disease type 1 (PKD1). In these individuals, progressive enlargement of the cysts may compress functional parenchyma and lead to ESRD [Martignoni et al 2002]. Individuals with the TSC2/PKD1 contiguous gene syndrome are also at risk for developing the complications of PKD1, which include cystic lesions in other organs (e.g., the liver) and Berry aneurysms.

Malignant angiomyolipoma and renal cell carcinoma (RCC) may result in death. Although rare, these two tumors are much more common in TSC than in the general population [Pea et al 1998]. Cook et al [1996] reported that three out of 136 individuals with TSC had RCCs; Patel et al [2005] identified only one RRC (0.5%) out of 206 renal masses from individuals with TSC.

Heart. Cardiac rhabdomyomas are present in 47%-67% of individuals with TSC [Jones et al 1999, Dabora et al 2001, Sancak et al 2005]. These tumors have been documented to regress with time and eventually disappear. The cardiac rhabdomyomas are often largest during the neonatal period. In a meta-analysis of the literature, Verhaaren et al [2003] concluded that: (1) surgical intervention immediately after birth is only necessary when cardiac outflow obstruction occurs; and that (2) if cardiac outflow obstruction does not occur at birth, the individual is unlikely to have health problems from these tumors later.

Lung. Lymphangiomyomatosis of the lung is estimated to occur in 1%-6% of individuals and primarily affects women between age 20 and 40 years. Individuals may present with shortness of breath or hemoptysis. Chest radiographs reveal a diffuse reticular pattern and CT examination shows diffuse interstitial changes with infiltrates and cystic changes. Pneumothorax and chylothorax may occur. Some individuals progress to respiratory failure and death.

Multifocal micronodular pneumonocyte hyperplasia (MMPH), characterized by multiple nodular proliferations of type II pneumocytes, was first described in association with TSC in 1991 [Popper et al 1991]. Muir et al [1998] described 14 individuals with MMPH (12 females and two males): seven had TSC/LAM; two had TSC only; three had LAM only; and two had neither. Fewer than 50 cases of MMPH have been reported to date in persons with TSC.

Eye. The retinal lesions of TSC are hamartomas (elevated mulberry lesions or plaque-like lesions) and achromic patches (similar to the hypopigmented skin lesions). One or more of these lesions may be present in up to 75% of affected individuals. These lesions are usually asymptomatic.

Extrarenal angiomyolipomas (AMLs). Although rare, extrarenal angiomyolipomas have been reported [Elsayes et al 2005]. In a retrospective study of sonographic and CT images, Fricke et al [2004] identified eight hepatic AMLs in 62 individuals with TSC (13%).

Genotype-Phenotype Correlations

Except for the TSC2/PKD1 contiguous gene deletion syndrome (see Clinical Description), the phenotypes caused by mutations in TSC1 and TSC2 were initially considered to be identical; however, with more genotype/phenotype data available, it appears that TSC2 mutations produce a more severe phenotype than TSC1 mutations [Dabora et al 2001, Lewis et al 2004, Sancak et al 2005, Au et al 2007].

Renal cysts occur in individuals with the following:

Penetrance

After detailed evaluation of each individual known to have a TSC1 or TSC2 mutation, the penetrance of TSC is now thought to be 100%. Rare cases of seeming non-penetrance have been reported; however, molecular studies have resolved these cases, revealing two different TSC-causing mutations in the family and the existence of germline mosaicism in others [Connor et al 1986, Webb & Osborne 1991].

Variable expressivity. Variable expressivity occurs because TSC is autosomal dominant at the level of the organism but autosomal recessive at the cellular level. Both the TSC1 and TSC2 genes have properties consistent with tumor suppressor genes functioning according to Knudson's "two hit" hypothesis [Knudson 1971]. The clinical variability results from the random nature of the second "hit" in individuals who have a germline mutation. Given that tuberin and hamartin are subjected to regulation through multiple cell signaling pathways, both genetic and environmental factors acting on these pathways are expected to influence the disease expression in individuals with TSC who, by definition, have only one functional copy of TSC1 or TSC2.

Anticipation

Anticipation has not been observed in TSC.

Nomenclature

Terms used in the past to describe findings in tuberous sclerosis that are now outdated or inappropriate but have not yet been eliminated from the medical literature include the following:

  • Adenoma sebaceum. Used previously to describe facial lesions that are now better characterized as facial angiofibromas because the lesions have no "sebaceous" elements

  • Myomata. Replaced by the more precise terms cardiac rhabdomyomas and cortical tubers

  • White ash leaf spots. Used previously to describe the hypopigmented macules; now discouraged because the hypopigmented macules can be any shape or size. Hypopigmented macules of a certain size and shape are not more or less indicative of an association with tuberous sclerosis complex.

  • Epiloia. Used to describe individuals with TSC and epilepsy

Prevalence

The incidence of TSC may be as high as one in 5,800 live births [Osborne et al 1991]. A high mutation rate (1:25,000) is estimated [Sampson et al 1989].

Differential Diagnosis

For current information on availability of genetic testing for disorders included in this section, see GeneTests Laboratory Directory. —ED.

Many of the features of TSC are nonspecific and can be seen as isolated findings or as a feature of another disease.

Skin. Hypopigmented macules have been observed in 0.8% of newborns in some studies and in most cases have no medical significance [Alper & Holmes 1983]. A study by Vanderhooft et al [1996] determined that three or more hypopigmented macules are much more likely to be seen in an individual who will be diagnosed with TSC. Other diseases with hypopigmented macules as part of the phenotype include vitiligo, nevus depigmentus, nevus anemicus, piebaldism, and Vogt-Koyanagi-Harada syndrome. Associated findings can usually distinguish these diseases from TSC.

A single facial angiofibroma likewise is not diagnostic of TSC. On physical examination, acne vulgaris, acne rosacea, or multiple trichoepithelioma can be mistaken for angiofibromas; but biopsy easily distinguishes among them.

The shagreen patch of TSC does not differ from other connective tissue nevi, which are rare but are seen sporadically or in families.

Ungual fibromas can result from trauma, but generally traumatic ungual fibromas are single lesions and their presence can be explained (e.g., by a particular manner of holding a golf club). Ungual fibromas must be distinguished from epithelial inclusion cysts, verruca vulgaris, and infantile digital fibromatosis.

CNS. Multiple lesions (cortical tubers, subependymal nodules [SENs], subependymal giant cell astrocytomas [SEGAs], or radial migrating lines) in the CNS are definitive features of TSC.

Kidneys. Renal cysts are seen commonly in the population (1%-2%), but uncommonly in individuals younger than age 30 years [Becker & Schneider 1975, Northrup et al 1993].

Renal angiomyolipomas (AMLs) are rare tumors sometimes observed in individuals with no other medical problems. Studies have shown that such sporadic AMLs can have loss of heterozygosity (LOH) for the TSC2 gene and surrounding markers, leading to the conclusion that they occur as a result of loss of function of the TSC2 gene in individuals not affected with tuberous sclerosis complex.

Lungs. Some women who have lymphangioleiomyomatosis (LAM) also have renal angiomyolipomas but no other findings of TSC. These individuals do not transmit TSC or lymphangioleiomyomatosis to their offspring. Individuals affected with lymphangioleiomyomatosis and renal angiomyolipomas who have no other features of TSC do not meet diagnostic criteria for TSC [Roach & Sparagana 2004].

Heart. Infants with cardiac rhabdomyomas have a 50% chance of being affected with TSC. The other 50% have cardiac rhabdomyomas as an isolated finding. Potentially, sporadically occurring cardiac rhabdomyomas could also have a mechanism similar to the sporadic AMLs described (see Kidneys).

Management

Evaluations Following Initial Diagnosis

To establish the extent of disease in an individual diagnosed with tuberous sclerosis complex (TSC), the following evaluations were recommended by the Clinical Issues Panel, Panel 1, at the Tuberous Sclerosis Consensus Conference in July 1998 and revised recently [Roach & Sparagana 2004]:

  • Medical history, especially for features of TSC

  • Family history, especially for features of TSC

  • Physical examination with use of a Woods lamp (ultraviolet light) in a darkened room and special attention to dermatologic findings

  • Cranial CT/MRI

  • Renal ultrasonography

  • Ophthalmologic examination

  • Electrocardiography and echocardiography, if cardiac symptoms indicate

  • Electroencephalography, if seizures are present

  • Neurodevelopmental and behavioral evaluation

  • Chest CT for adult females

Treatment of Manifestations

CNS. Early identification of an enlarging giant cell astrocytoma permits removal before symptoms develop and before it becomes locally invasive, and is the reason for performing routine brain imaging of children and adolescents with documented subependymal nodules [Weiner et al 1998].

The efficacy of different treatment options for infantile spasms varies between individuals. Early studies suggested that more than 90% of individuals with TSC and infantile spasms did respond to vigabatrin compared to 54% of individuals without TSC [Aicardi et al 1996].

In a Cochrane Review of 11 randomized controlled trials of single drug use to treat infantile spasms, Hancock et al [2003] concluded that vigabatrin was not superior to other anticonvulsants; however, because of the insufficient number of individuals in these studies, the authors were unable to provide a statistically significant conclusion.

A retrospective study suggested levetiracetam can be used as adjunctive antiepileptic therapy in treatment of TSC [Collins et al 2006].

The seizures in TSC may be resistant to polydrug therapy with anticonvulsants. A number of small studies have reported excellent results after epilepsy surgery [Avellino et al 1997, Baumgartner et al 1997, Weiner et al 1998, Romanelli et al 2002, Thiele 2004].

  • Jarrar et al [2004] found that unifocal-onset seizures and mild to no developmental delay at the time of surgery predict excellent long-term outcome.

  • Romanelli et al [2004] discussed the use of electroencephalographic techniques, functional neuroimaging, and invasive cortical mapping to aid the surgeon in evaluating options for surgical resection in individuals with TSC who have multifocal epileptogenic zones.

  • Kagawa et al [2005] found that increased radiolabeled alpha-methyl-L-tryptophan uptake on PET scans identifies epileptogenic tubers with 83% accuracy, thus enhancing successful epilepsy surgery.

  • Weiner et al [2006] used a three-staged bilateral surgical approach in 22 persons with TSC. They suggest that this approach can help identify both primary and secondary epileptogenic zones in young persons with multiple tubers.

Kidney. Several investigators have determined that the size of an angiomyolipoma is the best indicator of those tumors that are likely to be symptomatic (i.e., cause pain and/or hemorrhage) and thus require intervention. Pain usually results from hemorrhage into the tumor. Angiomyolipomas greater than 3.5 to 4.0 cm in diameter have the greatest risk of hemorrhage. It is recommended that those with symptomatic angiomyolipomas greater than 3.5 to 4.0 cm be considered for prophylactic renal arterial embolization or renal sparring surgery (i.e., enucleation or partial nephrectomy) [Oesterling et al 1986, Steiner et al 1993, van Baal et al 1994].

LAM. LAM affects almost exclusively women of childbearing age in whom estrogen is suspected to be involved in stimulating growth of smooth muscle cells in the lung. Medroxy-progesterone treatment and/or oophorectomy are used to reduce the production of estrogen but the response to treatment is highly individual. Oxygen therapy is necessary with impaired lung function and patients with severe disease require lung transplantation.

Surveillance

The following routine follow up is recommended for individuals with TSC:

  • Cranial CT/MRI every one to three years for children and adolescents

  • Renal ultrasonography every one to three years in persons with no previously identified renal lesions

  • Semiannual renal sonography in individuals with angiomyolipomas less than 3.5 to 4.0 cm

  • Renal CT/MRI, if large or numerous renal tumors are detected by renal ultrasound examination

  • Electroencephalography for seizure management as needed

  • Neurodevelopmental and behavioral evaluations for children at the time of school entry and in response to educational or behavioral concerns

  • Echocardiography, if cardiac symptoms indicate

  • Chest CT, if pulmonary symptoms indicate

Note: (1) Individuals with retinal lesions seldom develop progressive visual loss; therefore, ophthalmologic evaluations beyond those required for routine health care maintenance are unnecessary. (2) Routine dermatologic evaluations are unnecessary for most individuals. Those who may benefit from treatments should be referred to an experienced specialist.

Testing of Relatives at Risk

Identifying affected relatives permits monitoring for early detection of problems associated with TSC, thus leading to earlier treatment and better outcomes. If the family-specific mutation is known, molecular genetic testing can be used to identify those at-risk relatives who are affected; otherwise, examination should be undertaken for the findings of TSC (see Diagnosis).

See Genetic Counseling for issues related to testing of at-risk relatives for genetic counseling purposes.

Therapies Under Investigation

Several clinical trials to test the effect of drugs on manifestations of TSC are underway:

Giant cell astrocytoma

  • Oral rapamycin therapy induced regression of astrocytomas associated with TSC in five persons [Franz et al 2006]; however, some tumors returned to the pretreatment size and some increased to a size greater than pretreatment size following cessation of treatment. Subsequent resumption of rapamycin treatment resulted in tumor regression.

  • A Phase I/II trial (NCT00411619) began in December 2006 to study the safety and efficacy of everolimus (RAD001) on giant cell astrocytoma. Patient recruitment is ongoing.

Infantile spasms. A randomized, controlled trial (NCT00441896) began in 2007 to study the safety and efficacy of ganaxolone in controlling infantile spasms. Patient recruitment is ongoing.

Renal angiomyolipoma. A Phase II rapamycin trial (NCT00126672) began in 2005 and is to continue until 2010 to examine safety and efficacy of sirolimus on renal angiomyolipomas.

Note: Using the natural Tsc2 mutant rat (Eker rat) model, Kenerson et al [2005] reported significant reduction of renal tumor size in rats treated with rapamycin; however, they also detected evidence for rapamycin-resistant lesions in rats with prolonged therapy.

LAM

  • A Phase III clinical trial (NCT00414648) began in late 2006 and is to continue through 2011 to assess effects of rapamycin on pulmonary disease in those with LAM.

  • Recent clinical trials using rapamycin for renal angiomyolipoma in persons with TSC and LAM reported decrease in tumor volume during treatment, but increase in tumor volume after treatment stopped, thus requiring further treatment to control tumor growth [Bissler et al 2008, Davies et al 2008]. Lung function in persons with LAM improved in Bissler’s study, but not in Davies’ study, suggesting the need for larger multicenter trials.

Search ClinicalTrials.gov for access to information on clinical studies for a wide range of diseases and conditions.

Other

Genetics clinics, staffed by genetics professionals, provide information for individuals and families regarding the natural history, treatment, mode of inheritance, and genetic risks to other family members as well as information about available consumer-oriented resources. See the GeneTests Clinic Directory.

See Consumer Resources for disease-specific and/or umbrella support organizations for this disorder. These organizations have been established for individuals and families to provide information, support, and contact with other affected individuals.

Genetic Counseling

Genetic counseling is the process of providing individuals and families with information on the nature, inheritance, and implications of genetic disorders to help them make informed medical and personal decisions. The following section deals with genetic risk assessment and the use of family history and genetic testing to clarify genetic status for family members. This section is not meant to address all personal, cultural, or ethical issues that individuals may face or to substitute for consultation with a genetics professional. To find a genetics or prenatal diagnosis clinic, see the GeneTests Clinic Directory.

Mode of Inheritance

Tuberous sclerosis complex (TSC) is inherited in an autosomal dominant manner.

Risk to Family Members

Parents of a proband

  • About one-third of probands with TSC have an affected parent.

  • Two-thirds of individuals have the altered TSC1 or TSC2 gene as the result of a de novo mutation.

  • Recommendations for the evaluation of parents of a child with no apparent family history of tuberous sclerosis include thorough skin examination, retinal examination, brain imaging, renal ultrasound examination, and molecular genetic testing if the disease-causing mutation has been identified in the proband. Evaluation of parents may determine that one is affected but has escaped previous diagnosis because of failure by health care professionals to recognize the syndrome and/or a milder phenotypic presentation. Therefore, an apparently negative family history cannot be confirmed until appropriate evaluations have been performed.

Sibs of a proband

Offspring of a proband. Each child of an individual with tuberous sclerosis has a 50% chance of inheriting the mutation.

Other family members of a proband. The risk to other family members depends on the genetic status of the proband's parents. If a parent is affected or has the disease-causing mutation, his/her family members are at risk.

Related Genetic Counseling Issues

See Management, Testing of Relatives at Risk for information on testing at-risk relatives for the purpose of early diagnosis and treatment.

The penetrance of TSC1 and TSC2 mutations is thought to be 100%. However, TSC exhibits extreme variability in clinical findings both among and within families. See Penetrance.

Although some genotype-phenotype correlations are known, using results of molecular genetic testing to predict phenotype can be difficult. See Genotype-Phenotype Correlations.

Considerations in families with an apparent de novo mutation. When neither parent of a proband with an autosomal dominant condition has the disease-causing mutation or clinical evidence of the disorder, it is likely that the proband has a de novo mutation. However, possible non-medical explanations including alternate paternity or maternity (e.g., with assisted reproduction) or undisclosed adoption could also be explored.

Family planning

  • The optimal time for determination of genetic risk and discussion of the availability of prenatal testing is before pregnancy. Similarly, decisions about testing to determine the genetic status of at-risk asymptomatic family members are best made before pregnancy.

  • It is appropriate to offer genetic counseling (including discussion of potential risks to offspring and reproductive options) to young adults who are affected or who have a disease-causing mutation.

DNA banking. DNA banking is the storage of DNA (typically extracted from white blood cells) for possible future use. Because it is likely that testing methodology and our understanding of genes, mutations, and diseases will improve in the future, consideration should be given to banking DNA of affected individuals. DNA banking is particularly relevant when the sensitivity of currently available testing is less than 100%. See graphic element for a list of laboratories offering DNA banking.

Prenatal Testing

High-risk pregnancies

  • Molecular genetic testing. Prenatal diagnosis for pregnancies at increased risk is possible by analysis of DNA extracted from fetal cells obtained from chorionic villus sampling (CVS) at approximately ten to 12 weeks' gestation or amniocentesis usually performed at approximately 15-18 weeks' gestation. The disease-causing allele of an affected family member must be identified before prenatal testing can be performed.

    Note: Gestational age is expressed as menstrual weeks calculated either from the first day of the last normal menstrual period or by ultrasound measurements.

  • Fetal imaging studies. For families in which a disease-causing mutation has not been identified, high-resolution ultrasound examination for tumors is available, but its sensitivity is unknown. Fetal MRI may be of use in the evaluation of TSC in fetuses at 50% risk.

    Note: The cardiac tumors are generally not detected until the third trimester.

Low-risk pregnancies. When cardiac lesions consistent with rhabdomyoma are identified on fetal ultrasound examination, the risk to the fetus with no known family history of TSC to have TSC is 50%.

Preimplantation genetic diagnosis (PGD) is available and has been used for families in which the disease-causing mutation has been identified. For laboratories offering PGD, see graphic element.

Molecular Genetics

Information in the Molecular Genetics and OMIM tables may differ from that elsewhere in the GeneReview: tables may contain more recent information. —ED.

Table A. Tuberous Sclerosis Complex: Genes and Databases

Gene Symbol Chromosomal Locus Protein Name Locus Specific HGMD
TSC1 9q34 Hamartin TSC Mutation Database TSC1
TSC2 16p13.3 Tuberin Tuberous sclerosis 2 (TSC2) Database TSC2

Data are compiled from the following standard references: gene symbol from HGNC; chromosomal locus, locus name, critical region, complementation group from OMIM; protein name from UniProt. For a description of databases (Locus Specific, HGMD) linked to, click here.

Table B. OMIM Entries for Tuberous Sclerosis Complex (View All in OMIM)

191092 TSC2 GENE; TSC2
191100 TUBEROUS SCLEROSIS; TS
605284 TSC1 GENE; TSC1

Molecular Genetic Pathogenesis

Tuberin has GTPase-activating protein functions for the small G-proteins (Rap1a and Rab5) [Xiao et al 1997] and functions as a major regulator of small G-protein Rheb and downstream pathway on protein translation, growth and cell proliferation [Inoki et al 2003].

Hamartin interacts with the ezrin-radxin-moesin (ERM) family of actin-binding proteins [Lamb et al 2000]. Hamartin also regulates the cell cycle through interacting with CDK [Astrinidis et al 2003]. Growing of neurites, synapse formation and axon development are also regulated by hamartin [Floricel et al 2007, Knox et al 2007]. In addition, hamartin was shown to be suppressed by TNFα activated IKKβ phosphorylation at Ser511 resulting in dissociation of tuberin hamartin complex, activating S6K and VEGF production [Lee et al 2007].

Hamartin and tuberin form heterodimers, suggesting that they may act in concert to regulate cell proliferation [Plank et al 1998, van Slegtenhorst et al 1998]. Most recently, tuberin and hamartin were shown to be key regulators of the AKT pathway and to participate in several other signaling pathways including the MAPK, AMPK, b-catenin, calmodulin, MTOR/S6Kinase, CDK, and cell cycle pathways [Kozma & Thomas 2002, Astrinidis et al 2003, El-Hashemite et al 2003, Harris & Lawrence 2003, Yeung 2003, Au et al 2004, Birchenall-Roberts et al 2004, Li et al 2004, Mak & Yeung 2004].

All TSC1 mutations and 70% of TSC2 mutations are predicted to produce truncated protein products that fail to regulate protein translation and subsequently lead to uncontrolled cell growth and cell proliferation to cause a focal malformation consisting of disorganized arrangement of tissue types that are normally present in the anatomical area (hamartias) and hamartomas formation [Au et al 2004].

The type of mutation (protein truncation vs missense) does not predict the severity of the phenotype.

  • Almost all TSC1 mutations are predicted to cause truncation of the hamartin protein; the location of the TSC1 mutation does not appear to associate with disease severity.

  • Approximately 70% of TSC2 mutations are predicted to cause complete loss or truncation of the tuberin protein and the remaining 30% involve change of a single or a few amino acids in tuberin. Disease severity does not seem to associate with the location of the TSC2 mutation.

These observations are consistent with more signal pathway kinases targeting tuberin than hamartin to dissociate the heterodimer complex therefore releasing suppression of mTOR functions in growth and cell proliferation. The exception is that some missense TSC2 mutations (i.e., p.Arg905Gln and p.Gln1503Pro) are associated with milder disease phenotypes [Khare et al 2001, Jansen et al 2006].

The clinical variability results in part from the random nature of the second "hit" in individuals who have a germline mutation. Additionally, because tuberin and hamartin are subjected to multiple cell signaling pathway regulation, both genetic and environmental factors targeting these pathways are expected to influence disease expression in individuals who have only one functional copy of TSC1 or TSC2.

TSC1

Normal allelic variants. The TSC1 gene is approximately 50 kb in size and consists of 23 exons. The first two exons are noncoding and alternatively spliced. The gene has no known structural homologies to other known gene families. TSC1 exhibits polymorphic variants in the coding regions and it is not known whether these variants affect the expression or function of hamartin [van Slegtenhorst et al 1997, Au et al 1998].

Pathologic allelic variants. More than 400 TSC1 mutations have been identified in individuals/families with TSC [van Slegtenhorst et al 1997, Jones et al 1999, Dabora et al 2001, Au et al 2004, Sancak et al 2005, Au et al 2007]. Most mutations are unique, but a few "warm spots" are known including specific codons in exon 15. Other mutations are scattered throughout the exons and splice sites. Mutation types by percentage are shown in Table 2. Large deletions and rearrangements of TSC1 are rare. A few missense mutations have been identified in TSC1 but their significance is not clear except for p.Ser487Cys [Choi et al 2006], which was shown to be a target of Iκ kinase β upon activation by TNFα [Lee et al 2007]. The affected female patient was described as having seizure, white macules, cortical tuber/SEN, and cardiac rhabdomyoma.

Table 2. Types of Mutations Observed in TSC1 (n=432)

Mutation TypePercent of all TSC1 Mutations
Small deletions and insertions52%
Nonsense40%
Splice8%
Large deletions and rearrangements<1%
Missense<1%

For more information, see Table A: locus-specific databases and HGMD.

Table 3. Selected TSC1 Pathologic Allelic Variants

DNA Nucleotide
Change
Protein Amino
Acid Change
Reference
Sequences
c.1460C>Gp.Ser487CysNM_000368.3
NP_000359.1

See Quick Reference for an explanation of nomenclature. GeneReviews follows the standard naming conventions of the Human Genome Variation Society (www.hgvs.org).

Normal gene product. The protein product, hamartin, has one transmembrane domain and two coiled-coil domains. The first coiled-coil domain is necessary for protein-protein interactions between hamartin and tuberin. Other domains are responsible for interacting with cytoskeletal ERM proteins, small G-protein Rho, cell division protein kinases, and Iκ kinase β.

Abnormal gene product. See Molecular Genetic Pathogenesis.

TSC2

Normal allelic variants. TSC2 is approximately 50 kb in size and consists of 41 exons. Exons 25 and 31 are alternatively spliced. TSC2 codes for at least six alternatively spliced transcripts. TSC2 exhibits many polymorphic variants in its coding region; it is not known whether these variants affect the expression or function of tuberin [van Slegtenhorst et al 1997, Jones et al 1999, Dabora et al 2001, Sancak et al 2005, Au et al 2007].

Pathologic allelic variants. More than 1100 TSC2 mutations have been identified in individuals/families affected by TSC. Approximately 36% of TSC2 mutations are located within exons 32-41, the carboxy domain of tuberin that consists of several important functional motifs (e.g., GAP domain, estrogen receptor- and calmodulin-binding domains, and multiple signal pathway kinase targets). Mutation types by percentage are shown in Table 4. Missense mutations account for approximately 28% of all TSC2 mutations with 50% concentrated to the carboxy domain. However, no missense mutations so far identified are the target of kinases with the exception of one single case at the Tyr1571 residue, which is the target of tyrosine kinase. Approximately 8% of TSC2 mutations are large deletions or rearrangements with 6.2% partial-gene deletions and 1.6% whole-gene deletions. Approximately 3.7% involve both TSC2 and PKD1 gene. The remaining roughly 64% include small deletions, insertions, and nonsense and splice site mutations.

Table 4. Types of Mutations Observed in TSC2 (n=1178)

Mutation TypePercent of TSC2 Mutations
Small deletions and insertions~29%
Missense~28.4%
Nonsense~22%
Splice~12.8%-15%
Large deletions and rearrangements~7.8%

For more information, see Table A: locus-specific databases and HGMD.

Table 5. Selected TSC2 Pathologic Allelic Variants

DNA Nucleotide
Change
Protein Amino
Acid Change
Reference
Sequences
c.2714G>Ap.Arg905GlnNM_000548.3
NP_000539.2
c.4508A>Cp.Gln1503Pro

See Quick Reference for an explanation of nomenclature. GeneReviews follows the standard naming conventions of the Human Genome Variation Society (www.hgvs.org).

Normal gene product. The protein product for TSC2 is tuberin. See Molecular Genetic Pathogenesis.

Abnormal gene product. See Molecular Genetic Pathogenesis.

Resources

See Consumer Resources for disease-specific and/or umbrella support organizations for this disorder. These organizations have been established for individuals and families to provide information, support, and contact with other affected individuals. GeneTests provides information about selected organizations and resources for the benefit of the reader; GeneTests is not responsible for information provided by other organizations.—ED.

References

Medical Genetic Searches: A specialized PubMed search designed for clinicians that is located on the PubMed Clinical Queries page graphic element

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Published Statements and Policies Regarding Genetic Testing

No specific guidelines regarding genetic testing for this disorder have been developed.

Suggested Reading

Sampson JR. Tuberous sclerosis. In: Scriver CR, Beaudet AL, Sly WS, Valle D, Vogelstein B (eds) The Metabolic and Molecular Bases of Inherited Disease (OMMBID), McGraw-Hill, New York, Chap 233. Available at www.ommbid.com. Accessed 5-4-09.
Steffann J, Munnich A, Bonnefont JP (2002) Tuberous Sclerosis (TSC). Atlas of Genetics and Cytogenetics Oncology and Haematology. atlasgeneticsoncology.org.

Chapter Notes

Revision History

  • 7 May 2009 (me) Comprehensive update posted live

  • 5 December 2005 (me) Comprehensive update posted to live Web site

  • 27 September 2004 (cd) Revision: FISH clinically available for TSC2 deletions

  • 29 August 2003 (me) Comprehensive update posted to live Web site

  • 3 December 2002 (bp) Revisions

  • 18 April 2001 (me) Comprehensive update posted to live Web site

  • 13 July 1999 (pb) Review posted to live Web site

  • 5 February 1999 (hn) Original submission

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