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Pagon RA, Bird TD, Dolan CR, et al., editors. GeneReviews™ [Internet]. Seattle (WA): University of Washington, Seattle; 1993-.
Summary
Disease characteristics. X-linked infantile spinal muscular atrophy (XL-SMA) is characterized by congenital hypotonia and areflexia and evidence of degeneration and loss of anterior horn cells (i.e., lower motor neurons) in the spinal cord and brain stem. Often congenital contractures and/or fractures are present. Intellect is normal. Life span is shortened because of progressive ventilatory insufficiency resulting from chest muscle involvement.
Diagnosis/testing. The diagnosis of XL-SMA is based on clinical findings; evidence of degeneration and loss of anterior horn cells in the spinal cord and brain stem; normal SMN1 molecular genetic testing; and family history consistent with X-linked inheritance. Molecular genetic testing of UBA1, the only gene currently known to be associated with XL-SMA, is available on a research basis only.
Management. Treatment of manifestations: Assure adequate caloric intake by caloric supplementation and/or gastrostomy feedings as necessary; manage constipation with diet; provide rigorous pulmonary toilet, supplemental oxygen, and noninvasive ventilatory support; discuss "do not attempt to resuscitate" status with the family before respiratory failure occurs. Orthopedic consultation and physical and occupational therapy to manage contractures. Prevention of secondary complications: precautions against infection. Surveillance: routine evaluations by a multidisciplinary team, including neurologic evaluation; assessment of pulmonary function, caloric intake, and weight gain; evaluation for scoliosis and/or kyphosis.
Genetic counseling. XL-SMA is inherited in an X-linked manner. Carrier females have a 50% chance of transmitting the disease-causing mutation with each pregnancy. Males who inherit the mutation will be affected; females who inherit the mutation will be carriers and will usually not be affected. Affected males do not reproduce. For those families in which the mutation is known, carrier testing for family members at risk and prenatal testing for at-risk pregnancies may be possible through laboratories offering custom mutation analysis.
Diagnosis
Clinical Diagnosis
The diagnosis of X-linked infantile spinal muscular atrophy (XL-SMA) should be considered in children who meet the following criteria:
Congenital hypotonia and areflexia on physical examination
Congenital contractures and/or fractures
Evidence of degeneration and loss of anterior horn cells (i.e., lower motor neurons) in the spinal cord and brain stem
Normal SMN1 molecular genetic testing to rule out autosomal recessive spinal muscular atrophy
Male gender in a simplex case (i.e., a single occurrence in a family) or X-linked pattern of inheritance in families with more than one affected individual
Testing
Electromyogram (EMG) should demonstrate findings of denervation.
Molecular Genetic Testing
Gene. UBA1 (previously referred to as UBE1) is the only gene currently known to be associated with XL-SMA.
Other loci. Linkage to the X chromosome region Xp11.3-q11.1 has been demonstrated in families with X-linked SMA without mutations observed in UBA1 [Kobayashi et al 1995, Dressman et al 2007].
Research testing. Five families have been identified with UBA1 mutations with complete cosegregation of the disease [Dressman et al 2007, Ramser et al 2008].
Table 1. Summary of Molecular Genetic Testing Used in X-Linked Infantile Spinal Muscular Atrophy
| Gene Symbol | Test Method | Mutations Detected | Mutation Detection Frequency by Test Method | Test Availability | |
|---|---|---|---|---|---|
| Affected Males 1 | Carrier Females | ||||
| UBA1 | Sequence analysis | Sequence variants | Unknown | Unknown 2 | Research only 3 |
Test Availability refers to availability in the GeneTests Laboratory Directory. GeneReviews designates a molecular genetic test as clinically available only if the test is listed in the GeneTests Laboratory Directory by either a US CLIA-licensed laboratory or a non-US clinical laboratory. GeneTests does not verify laboratory-submitted information or warrant any aspect of a laboratory's licensure or performance. Clinicians must communicate directly with the laboratories to verify information.
1. Five families detected so far with UBA1 mutations with complete cosegregation of the disease [Ramser et al 2008].
2. Sequence analysis of genomic DNA cannot detect deletion of an exon(s) or whole-gene deletions on the X chromosome in carrier females.
3. No laboratories offering clinical molecular genetic testing for X-linked infantile spinal muscular atrophy are listed in the GeneTests Laboratory Directory. However, clinical confirmation of mutations identified in research laboratories may be available for families in which the disease-causing mutations have been identified. For laboratories offering such testing, see
.
Testing Strategy
To confirm/establish the diagnosis in a proband
Molecular genetic testing of SMN1 to rule out autosomal recessive SMA
Testing for UBA1 mutations
Note: Such testing is available in research laboratories only. (2) Clinical confirmation of mutations identified in a research laboratory may be available for families in which a disease-causing mutation has been identified in a research laboratory.
Carrier testing for at-risk relatives requires prior identification of the disease-causing mutations in the family.
Note: Carriers are heterozygotes for this X-linked disorder and are usually unaffected.
Prenatal diagnosis and preimplantation genetic diagnosis (PGD) for at-risk pregnancies require prior identification of the disease-causing mutation in the family.
Genetically Related (Allelic) Disorders
No other phenotypes are known to be associated with mutations in UBA1.
Clinical Description
Natural History
X-linked infantile spinal muscular atrophy (XL-SMA) is characterized by severe hypotonia and areflexia with loss of anterior horn cells in the spinal cord (i.e., lower motor neurons). The disease course is similar to that in the most severe forms of classic autosomal recessive SMA caused by mutations in SMN1: SMA type 0 (SMA0) and SMA type I (SMA1) (see Spinal Muscular Atrophy). In SMA0, prenatal onset of weakness and poor intrauterine movement results in congenital contractures. In SMA1, motor skills regress before age six months; affected children never are able to sit independently.
The weakness of XL-SMA is often prenatal in onset, manifest as polyhydramnios and poor movement in utero that results in congenital contractures. (Note: The term “arthrogryposis” is used to describe the presence of multiple congenital contractures of any cause.) Some neonates with XL-SMA are born with fractures that are perhaps related to poor fetal movement and subsequent bone fragility.
The most consistent features of XL-SMA are anterior horn cell disease and contractures with or without fractures.
The weakness of XL-SMA is progressive. Affected infants may achieve some early motor milestones, but the extent varies among families.
Other features of XL-SMA that are variably present include mild micrognathia, digital contractures, scoliosis, and cryptorchidism.
Cognitive ability, observed during an often-limited life span, appears to be normal in those with documented XL-SMA.
As in SMA1, the greatest morbidity in XL-SMA may be restrictive lung disease, which is usually in proportion to the child’s weakness and can be further complicated by aspiration and infection [Iannaccone 2007].
Children with XL-SMA usually die from respiratory failure by age two years; however, the age at death ranges from the neonatal period to adolescence, the latter in those exceptional cases in which extensive respiratory and medical support are provided.
Note: Individuals with a clinical picture consistent with SMA type II or type III have not yet been tested for mutations in UBA1; thus, it is not yet known if individuals with milder SMA phenotypes have UBA1 mutations.
Female carriers of XL-SMA are usually unaffected.
Penetrance
Evidence suggests that the disorder is fully penetrant in hemizygous males.
Nomenclature
XL-SMA has also been called:
X-linked lethal infantile SMA
X-linked arthrogryposis multiplex congenita
SMAX2
Note: SMAX1 is Kennedy disease (spinal and bulbar muscular atrophy), an unrelated X-linked, adult-onset disease.
Prevalence
The prevalence of XL-SMA is unknown. To date, 14 multigenerational families with affected family members have been identified throughout North America, Europe, Mexico, and Thailand [Author, personal observation]. This includes the family described by Greenberg et al [1988].
Differential Diagnosis
For current information on availability of genetic testing for disorders included in this section, see GeneTests Laboratory Directory. —ED.
The differential diagnosis of X-linked infantile spinal muscular atrophy (XL-SMA) caused by mutations in UBA1 includes classic autosomal recessive SMA caused by mutations in SMN1 and the genetically heterogeneous category of arthrogryposis (Table 2).
Table 2. Features of X-Linked SMA Compared to SMN1-Related SMA and Isolated Non-Progressive Arthrogryposis
| Features | XL-SMA | Autosomal Recessive SMA Type | Arthrogryposis 1 | ||||
|---|---|---|---|---|---|---|---|
| 0 | I | II | III | IV | |||
| Multiple contractures | + | + | - | - | - | - | + |
| Fractures | ± | ± | - | - | - | - | ± |
| Hypotonia | + | + | + | + | + | - | ± |
| Muscle weakness | + | + | + | + | + | + | ± |
| Motor regression | + | ± | + | + | ± | - | - |
| Normal cognition | + | + | + | + | + | + | + |
| Absent tendon reflexes | + | + | + | + (70%) | ± | ± | ± |
| Myopathic facies | ± | ± | - | - | - | - | - |
| Neurogenic atrophy | + | + | + | + | + | + | ± |
| Denervation by EMG | + | + | + | + | + | + | ± |
| Anterior horn cell loss | + | + | + | + | + | + | ± |
1. Isolated non-progressive
SMA Types by Inheritance Pattern
Classic Autosomal Recessive Spinal Muscular Atrophy
SMA, caused by mutation in SMN1, is characterized by loss of anterior horn cells with secondary muscle loss and weakness. SMA is classified by age of onset and maximum function achieved: SMA1 onset prior to age six months; SMA2 onset ages six to 12 months; SMA3 onset after age 12 months; and SMA4 onset in adulthood. SMA0 has been proposed for prenatal onset with severe joint contractures. Expression of SMN1 disease-causing mutations is modified by the copy number of SMN2.
Other Autosomal Recessive SMA (non-SMN)
Lethal congenital contracture syndrome (LCCS) is characterized by fetal akinesia sequence leading to multiple joint contractures and death in utero typically before 32 weeks’ gestation. Pathologic findings are anterior horn motor neuron degeneration and degeneration of descending tracts in the spinal cord. The highest gene frequency is in a genetically isolated subpopulation in northeastern Finland [Mäkelä-Bengs et al 1998]. The causative gene has been mapped to a restricted region on 9q34. LCCS differs from SMA because the descending tracts in the spinal cord are preserved in SMA. Mäkelä-Bengs et al [1998] consider LCCS pathophysiologically to be similar to amyotrophic lateral sclerosis (ALS).
Pontocerebellar hypoplasia with spinal muscular atrophy (pontocerebellar hypoplasia type 1) is characterized by hypoplasia of the olivary nuclei, pons, and cerebellum and progressive anterior horn cell loss. Hypotonia and weakness are usually noted in the newborn period and can be associated with congenital joint contractures and areflexia. Early presence of tongue fasciculations is similar to SMA1; however, ocular, bulbar, and facial abnormalities are distinct from classic SMA. Most die of respiratory failure in the first year of life. Survivors have failure to thrive and mental retardation. Spinal cord pathology shows anterior horn cell loss; demyelination may also be present. Affected sibling pairs and occasional parental consanguinity suggests autosomal recessive inheritance [Ryan et al 2000, Rudnik-Schöneborn et al 2003].
Spinal muscular atrophy with respiratory distress type 1 (SMARD1) is characterized by diaphragmatic paralysis in the first few months of life. Most affected infants have intrauterine growth retardation; many are born prematurely. Many have decreased fetal movement, and some have congenital foot contractures. All have early respiratory failure with a normally shaped thorax and diaphragmatic eventration. Weakness starts distally in the limbs, and extends to full paralysis. Nerve biopsy may show axonal degeneration; muscle biopsy shows neurogenic changes with fiber hypertrophy and atrophy. Mutations in IGHMBP2 encoding the immunoglobulin micro-binding protein 2 are causative [Grohmann et al 2003].
Autosomal Dominant SMA
Autosomal dominant (AD) SMA with onset in childhood and AD SMA with onset in adulthood are usually considered to be two separate entities. The AD of SMA is extremely rare in childhood, accounting for less than 2% of childhood SMA; however, up to 30% of adult-onset SMA may be transmitted in an AD manner [Rietschel et al 1992].
Childhood-onset AD SMA usually presents between birth and age eight years. The course is usually mild, but with variable expression. Affected individuals lose the ability to walk at varying ages, often not for several decades. Life expectancy may be significantly diminished. Unlike adult-onset AD SMA, the symptoms are not limited to proximal muscles.
One type of adult-onset AD SMA is proximal SMA, which presents with marked proximal muscle involvement. Onset is usually between ages 30 and 40 years, and does not occur before age 20 years. The disease course of adult-onset AD SMA tends to be much more rapid than that of childhood-onset AD SMA, with most affected individuals losing the ability to run within five years of the onset. Life expectancy averages 20 years after onset; thus, life span is shortened to about age 50 or 60 years.
Both childhood-onset AD SMA and adult-onset AD SMA have nearly complete penetrance. However, some families have members with childhood onset and others with adult onset, suggesting that in some families the same underlying condition may be responsible for both early and late onset [Rietschel et al 1992].
Scapuloperoneal spinal muscular atrophy is an AD form of SMA, which had been linked to 12q24.1-q24.31. Scapuloperoneal disorders are characterized by progressive weakness in a scapular and peroneal distribution, and may be myopathic or neurogenic. In this case, there was AD transmission with variable expressivity, and possible anticipation in subsequent generations. Other features include congenital absence of muscles, laryngeal palsy, and progressive distal weakness and atrophy [Isozumi et al 1996].
Congenital benign spinal muscular atrophy is described as congenital non-progressive atrophy and weakness of the lumbar paraspinal muscles and lower limb musculature associated with contractures [Frijns et al 1994]. Some children present with poor running and jumping, whereas others in the same family have congenital contractures. Involvement of upper limb and cranial musculature is variable. Although some affected individuals have normal nerve conduction velocities and action potentials, some have had concentric needle investigations that indicate neurogenic abnormalities such as reduced interference pattern, giant motor unit potentials in some muscle groups, and signs of denervation and reinnervation. In affected family members serum CK concentrations ranged between normal to twice the upper limit of normal. Muscle biopsy from the index case showed evidence for a neurogenic disorder, with group fiber atrophy with type 1 fiber predominance. The inheritance pattern was most consistent with AD, but it could also be X-linked or mitochondrial. Linkage analysis excluded linkage to SMN1.
Other X-Linked Forms of SMA
An X-linked distal SMA (DSMA) that maps to Xq13.1-q21 has features similar to Charcot Marie Tooth hereditary neuropathy, including distal weakness; atrophy of the muscles of the lower limbs, particularly in the tibioperoneal compartment; and pes cavus. Symptoms start in the first decade and progress slowly. Muscle weakness and atrophy of the upper extremities, predominantly the hands, occurs later. Affected males remain ambulatory. Electrophysiologic studies show a distal neurogenic EMG pattern; muscle biopsy shows a mixed neurogenic and myogenic pattern; sural nerve biopsy is normal [Takata et al 2004].
Other Non-SMN with Spinal Muscular Atrophy Phenotype
Other individuals who meet diagnostic criteria for SMA, but have normal SMN1 testing, have been described, suggesting the presence of an SMA type that is not associated with SMN1 mutations and that may be inherited in an autosomal recessive or X-linked manner [Nevo et al 1998, Felderhoff-Mueser et al 2002]. It is also known, based on previous DNA linkage studies in suspected XL-SMA families, that at least one phenocopy of this disorder does not map to the UBA1 gene region and may well be a very rare autosomal recessive disease mimicking SMA [Gerritsen et al 2003].
Arthrogryposis
Arthrogryposis is defined as multiple congenital contractures and absent flexion creases.
Arthrogryposis multiplex congenita is etiologically heterogeneous, i.e., has many etiologies. Underlying etiologies can include central nervous system causes, neurogenic effects, fetal constraint, and intrauterine vascular disruption (e.g., amyoplasia). In addition, congenital myasthenic syndromes are genetic disorders of the neuromuscular junction that may present with arthrogryposis. Arthrogryposis is often classified by affected body area, such as distal arthrogryposis, or, if generalized, arthrogryposis multiplex congenita. It is typically considered non-progressive, although the clinical course of arthrogryposis of neurogenic etiology follows that of the underlying condition. Inheritance pattern varies by etiology; many genes are known to be associated with different arthrogryposis types.
X-linked arthrogryposis. Of the many cases of X-linked arthrogryposis described in the literature, some may have been caused by mutations in UBA1 and perhaps other unknown genes. X-linked arthrogryposis has traditionally been classified by clinical severity [Hall et al 1982]:
Type I (severe lethal) X-linked arthrogryposis was described in males with severe congenital contractures, scoliosis, chest deformities, hypotonia, and characteristic facies who died in the first three months of life from respiratory insufficiency. Autopsy demonstrated a quantitative decrease in the number of lateral anterior horn cells [Kizilates et al 2005, Dressman et al 2007]. A UBA1 mutation was subsequently identified in one of these families (Family #4) [Ramser et al 2008].
Type II (moderately severe) X-linked arthrogryposis was described in males with severe contractures, bilateral ptosis, inguinal hernias, and cryptorchidism. These males had normal intellect [Hall et al 1982].
A few males with severe X-linked arthrogryposis have demonstrated muscle histology with ultrastructural changes with membranous bodies. These individuals had severe psychomotor retardation, in contrast to individuals with the milder types, who had normal development [Hennekam et al 1991].
Type III (resolving) X-linked arthrogryposis was described in males with mild to moderate contractures at birth that improved significantly over time. At birth, carrier females had contractures that were milder than in males; they resolved by the second decade of life [Hall et al 1982].
Management
Evaluations Following Initial Diagnosis
To establish the extent of disease in an individual diagnosed with X-linked infantile spinal muscular atrophy (XL-SMA), the following evaluations are recommended:
Nutrition/feeding
Determine if caloric intake is adequate.
Determine if dysphagia and/or fatigue during feeding are present [Iannaccone 2007]; consider swallowing evaluation, especially if aspiration is suspected [Wang et al 2007]
Determine if gastrostomy tube placement and fundoplication are indicated
Respiratory function
Physical examination to assess respiratory rate, work of breathing, presence of paradoxical breathing, chest wall shape, and skin perfusion
Baseline pulmonary studies to determine extent of restrictive airway disease and cough efficiency
Sleep evaluation to assess for sleep-disordered breathing including nocturnal hypoventilation and oxygen desaturation [Wang et al 2007]
Orthopedic evaluation to assess contractures
Neurologic evaluation to assess muscle tone and help guide supportive management [Iannaccone 2007]
Treatment of Manifestations
Management is similar to that for classic, SMN-mutation-positive SMA type 0 and SMA type I.
Feeding/growth
If oral intake is not adequate, consider higher calorie feeds and fat supplementation.
If weight gain is inadequate or the child cannot feed appropriately, consider nasogastric and possibly gastrostomy-tube placement.
Watch for swallowing dysfunction and consider a formal swallowing evaluation, especially if coughing or choking and/or recurrent pneumonias are evident as they may be signs of aspiration.
Manage gastroesophageal reflux disorder in the standard manner.
Manage constipation (resulting from weak abdominal musculature and poor motility) with diet (fiber and water content).
Respiratory
Provide rigorous pulmonary toilet, supplemental oxygen, and noninvasive ventilatory support.
Assist cough through mechanical devices or other means if the patient has ineffective cough.
Secretion mobilization may be achieved through chest physiotherapy and postural drainage.
Use oral suctioning as needed.
Use oximetry to monitor the patient’s oxygen exchange status [Wang et al 2007].
In some cases artificial ventilation and tracheostomy may be employed.
As in classic SMA, discuss "do not attempt to resuscitate" status with the family before respiratory failure occurs. This discussion may begin earlier, but is appropriate when abdominal breathing is present and/or the forced vital capacity is less than 30%. See Spinal Muscular Atrophy for further discussion of respiratory support in SMA.
Sleep disorders. Perform a sleep study if sleep-disordered breathing is suspected. Manage accordingly.
Orthopedic. Orthopedic management and physical and occupational therapy are indicated to manage contractures and prevent development of further contractures related to muscle weakness.
Prevention of Secondary Complications
Standard precautions against infection are appropriate.
Surveillance
Individuals with XL-SMA should be followed regularly by a physician familiar with this condition (e.g., a medical geneticist). Other subspecialists involved in ongoing care include the neurologist, pulmonologist, orthopedist, physical and occupational therapists, nutritionist, and gastroenterologist as needed.
Affected children should be followed at least monthly until the severity and disease course are more clearly delineated. Affected children frequently die in infancy or early childhood; their clinical status should be followed closely to optimize management, and so that the family has a good understanding of the progression and can make informed decisions.
The following are indicated on a routine basis:
Neurologic evaluations to assess muscle tone and help guide supportive management
Evaluation by a pulmonologist for evidence of progression of restrictive airway disease
Monitoring of caloric intake and weight, linear growth, head circumference, and growth velocity
Monitoring for scoliosis and kyphosis
Testing of Relatives at Risk
See Genetic Counseling for issues related to testing of at-risk relatives for genetic counseling purposes.
Therapies Under Investigation
Search ClinicalTrials.gov for access to information on clinical studies for a wide range of diseases and conditions. Note: There may not be clinical trials for this disorder.
Other
Genetics clinics, staffed by genetics professionals, provide information for individuals and families regarding the natural history, treatment, mode of inheritance, and genetic risks to other family members as well as information about available consumer-oriented resources. See the GeneTests Clinic Directory.
See Consumer Resources for disease-specific and/or umbrella support organizations for this disorder. These organizations have been established for individuals and families to provide information, support, and contact with other affected individuals.
Genetic Counseling
Genetic counseling is the process of providing individuals and families with information on the nature, inheritance, and implications of genetic disorders to help them make informed medical and personal decisions. The following section deals with genetic risk assessment and the use of family history and genetic testing to clarify genetic status for family members. This section is not meant to address all personal, cultural, or ethical issues that individuals may face or to substitute for consultation with a genetics professional. To find a genetics or prenatal diagnosis clinic, see the GeneTests Clinic Directory.
Mode of Inheritance
X-linked infantile spinal muscular atrophy (XL-SMA) is inherited in an X-linked manner.
Risk to Family Members
Parents of the proband
The father of an affected male will not have the disease nor will he be a carrier of the mutation.
In a family with more than one affected individual, the mother of an affected male is an obligate carrier.
If pedigree analysis reveals that the proband is the only affected family member, the mother may be a carrier or the affected male may have a de novo gene mutation, in which case the mother is not a carrier.
When an affected male is the only affected individual in the family, the following possibilities regarding his mother's carrier status need to be considered:
He has a de novo disease-causing mutation in UBA1 and his mother is not a carrier.
His mother has a de novo disease-causing mutation in UBA1, either (a) as a "germline mutation" (i.e., present at the time of her conception and therefore in every cell of her body); or (b) as "germline mosaicism" (i.e., present in some of her germ cells only).
His mother has a disease-causing mutation that she inherited from a maternal female ancestor.
Sibs of the proband
The risk to sibs depends on the carrier status of the mother.
If the mother of the proband has a disease-causing mutation, the chance of transmitting it in each pregnancy is 50%. Male sibs who inherit the mutation will be affected; female sibs who inherit the mutation will be carriers and will usually not be affected.
Offspring of the proband
Males with a severe phenotype do not generally survive.
Males with milder phenotypes will pass the disease-causing mutation to all of their daughters and none of their sons.
Other family members of the proband. The proband's maternal aunts may be at risk of being carriers and the aunts’ offspring, depending on their gender, may be at risk of being carriers or of being affected.
Carrier Detection
Carrier testing of at-risk female relatives may be available from laboratories offering clinical confirmation of mutations identified in research laboratories if the disease-causing mutation in a specific gene has been identified in the family. See
.
Related Genetic Counseling Issues
Family planning
The optimal time for determination of genetic risk is before pregnancy.
It is appropriate to offer genetic counseling (including discussion of potential risks to offspring and reproductive options) to young adults who are affected, are carriers, or are at risk of being carriers.
DNA banking is the storage of DNA (typically extracted from white blood cells) for possible future use. Because it is likely that testing methodology and our understanding of genes, mutations, and diseases will improve in the future, consideration should be given to banking DNA of affected individuals. DNA banking is particularly relevant when molecular genetic testing is available on a research basis only. See
for a list of laboratories offering DNA banking.
Prenatal Testing
No laboratories offering molecular genetic testing for prenatal diagnosis of XL-SMA caused by a UBA1 mutation are listed in the GeneTests Laboratory Directory. However, prenatal testing may be available for families in which the disease-causing mutation has been identified. For laboratories offering custom prenatal testing, see
.
Preimplantation genetic diagnosis (PGD) may be available for families in which the disease-causing mutation has been identified in an affected family member. For laboratories offering PGD, see
.
Molecular Genetics
Information in the Molecular Genetics and OMIM tables may differ from that elsewhere in the GeneReview: tables may contain more recent information. —ED.
Table A. Spinal Muscular Atrophy, X-Linked Infantile: Genes and Databases
| Gene Symbol | Chromosomal Locus | Protein Name | Locus Specific | HGMD |
|---|---|---|---|---|
| UBA1 | Xp11 | Ubiquitin-like modifier-activating enzyme 1 | UBA1 @ LOVD | UBA1 |
Table B. OMIM Entries for Spinal Muscular Atrophy, X-Linked Infantile (View All in OMIM)
Normal allelic variants. Two alternatively spliced transcript variants of UBA1 have been described. The second variant differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein. The gene consists of 26 exons with an alternative exon1a accounting for the alternative splicing. Translation begins in exon 2.
Pathologic allelic variants. See Table 3. To date, all pathologic variants detected have been in exon 15. Exon 15 encodes part of a highly conserved protein domain that interacts with gigaxonin.
Table 3. UBA1 Pathologic Allelic Variants Discussed in This GeneReview
| DNA Nucleotide Change | Protein Amino Acid Change | Reference Sequence |
|---|---|---|
| c.1617G>T | p.Met539Ile | NM_003334 NP_003325 |
| c.1639A>G | p.Ser547Gly | |
| c.1731C>T | p.Asn577Asn |
See Quick Reference for an explanation of nomenclature. GeneReviews follows the standard naming conventions of the Human Genome Variation Society (http://www
.hgvs.org).
Normal gene product. The protein encoded by UBA1 catalyzes the first step in ubiquitin conjugation to mark cellular proteins for degradation. It comprises 1058 amino acids.
Abnormal gene product. The variant c.1731C>T, which does not alter an amino acid (p.Asn577Asn), has been shown to alter methylation in the CpG dinucleotides of exon 15. Therefore, in the index cases of three families with XL-SMA, this c.1731C>T change results in one less methylated C nucleotide compared to normal. The complete disease mechanism related to the change in methylation is not yet understood [Ramser et al 2008].
Resources
See Consumer Resources for disease-specific and/or umbrella support organizations for this disorder. These organizations have been established for individuals and families to provide information, support, and contact with other affected individuals. GeneTests provides information about selected organizations and resources for the benefit of the reader; GeneTests is not responsible for information provided by other organizations.—ED.
References
Literature Cited
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- Felderhoff-Mueser U, Grohmann K, Harder A, Stadelmann C, Zerres K, Bührer C, Obladen M. Severe spinal muscular atrophy variant associated with congenital bone fractures. J Child Neurol. 2002;17:718–21. [PubMed: 12503654]
- Frijns CJM, Van Deutekom JV, Frants R, Jennekens F. Dominant congenital benign spinal muscular atrophy. Muscle Nerve. 1994;17:192–7. [PubMed: 8114789]
- Gerritsen J, Estrella E., Ahearn ME, Yariz KO, Baumbach L (2003). Fetal akinesia with anterior horn cell loss and congenital malformation in male siblings: Severe X-linked spinal muscular atrophy (XL-SMA) or a new disease entity? American Society of Human Genetics, Annual Meeting, Abstract 1743.
- Greenberg F, Fenolio KR, Hejtmancik JF, Armstrong D, Willis JK, Shapira E, Huntington HW, Haun RL. X-linked Infantile Spinal Muscular Atrophy. Am J Dis Child. 1988;142:217–9. [PubMed: 3341327]
- Grohmann K, Varon R, Stolz P, Schuelke M, Janetzki C, Bertini E, Bushby K, Muntoni F, Ouvrier R, Van Maldergem L, Goemans NM, Lochmüller H, Eichholz S, Adams C, Bosch F, Grattan-Smith P, Navarro C, Neitzel H, Polster T, Topaloğlu H, Steglich C, Guenther UP, Zerres K, Rudnik-Schöneborn S, Hübner C. Infantile spinal muscular atrophy with respiratory distress type 1 (SMARD1). Ann Neurol. 2003;54:719–24. [PubMed: 14681881]
- Hall J, Reed S, Scott C, Rogers J, Jones K, Camarano A. Three distinct types of X-linked arthrogryposis seen in 6 families. Clin Genet. 1982;21:81–97. [PubMed: 7200838]
- Hennekam R, Barth P, Van Lookeren Campagne W, De Visser M, Dingemans K. A family with severe X-linked arthrogryposis. Eur J Pediatr. 1991;150:656–60. [PubMed: 1915520]
- Iannaccone ST. Modern management of spinal muscular atrophy. J Child Neurol. 2007;22:974–8. [PubMed: 17761652]
- Isozumi K, DeLong R, Kaplan J, Deng HX, Iqbal Z, Hung WY, Wilhelmsen KC, Hentati A, Pericak-Vance MA, Siddique T. Linkage of scapuloperoneal spinal muscular atrophy to chromosome 12q24.1-q24.31. Hum Mol Genet. 1996;5:1377–82. [PubMed: 8872481]
- Kizilates SU, Talim B, Sel K, Köse G, Caglar M. Severe lethal spinal muscular atrophy variant with arthrogryposis. Pediatr Neurol. 2005;32:201–4. [PubMed: 15730903]
- Kobayashi H, Baumbach L, Matise TC, Schiavi A, Greenberg F, Hoffman EP. A gene for a severe lethal form of X-linked arthrogryposis (X-linked infantile spinal muscular atrophy) maps to human chromosome Xp11.3-q11.2. Hum Mol Genet. 1995;4:1213–6. [PubMed: 8528211]
- Mäkelä-Bengs P, Järvinen N, Vuopala K, Suomalainen A, Ignatius J, Sipilä M, Herva R, Palotie A, Peltonen L. Assignment of the disease locus for lethal congenital contracture syndrome to a restricted region of chromosome 9q34, by genome scan using five affected individuals. Am J Hum Genet. 1998;63:506–16. [PMC free article: PMC1377309] [PubMed: 9683599]
- Nevo Y, Kramer U, Legum C, Shomrat R, Fatal A, Soffer D, Harel S, Shapira Y. SMA type 2 unrelated to chromosome 5q13. Am J Med Genet. 1998;75:193–5. [PubMed: 9450884]
- Ramser J, Ahearn ME, Lenski C, Yariz K, Hellebrand H, von Rhein M, Clark RD, Schmutzler RK, Lichtner P, Hoffman EP, Meindl A, Baumbach-Reardon L. Rare Missense and Synonymous Variants in UBE1 Are Associated with X-Linked Infantile Spinal Muscular Atrophy. Am J Hum Genet. 2008;82:188–93. [PMC free article: PMC2253959] [PubMed: 18179898]
- Rietschel M., Rudnik-Schoneborn S., Zerres K. Clinical variability of autosomal dominant spinal muscular atrophy. J Neurol Sci. 1992;107:65–73. [PubMed: 1578236]
- Rudnik-Schöneborn S, Sztriha L, Aithala GR, Houge G, Laegreid LM, Seeger J, Huppke M, Wirth B, Zerres K. Extended phenotype of pontocerebellar hypoplasia with infantile spinal muscular atrophy. Am J Med Genet A. 2003;117A:10–7. [PubMed: 12548734]
- Ryan MM, Cooke-Yarborough CM, Procopis PG, Ouvrier RA. Anterior horn cell disease and olivopontocerebellar hypoplasia. Pediatr Neurol. 2000;23:180–4. [PubMed: 11020648]
- Takata RI, Speck Martins CE, Passosbueno MR, Abe KT, Nishimura AL, Da Silva MD, Monteiro A, Lima MI, Kok F, Zatz M. A new locus for recessive distal spinal muscular atrophy at Xq13.1-q21. J Med Genet. 2004;41:224–9. [PMC free article: PMC1735691] [PubMed: 14985388]
- Wang CH, Finkel RS, Bertini ES, Schroth M, Simonds A, Wong B, Aloysius A, Morrison L, Main M, Crawford TO, Trela A. Participants of the International Conference on SMA Standard of Care.; Consensus statement for standard of care in spinal muscular atrophy. J Child Neurol. 2007;22:1027–49. [PubMed: 17761659]
Published Statements and Policies Regarding Genetic Testing
No specific guidelines regarding genetic testing for this disorder have been developed.
Suggested Reading
- Dubowitz V. Chaos in classification of the spinal muscular atrophies of childhood. Neuromuscul Disord. 1991;1:77–80. [PubMed: 1845352]
Chapter Notes
Acknowledgments
The authors are grateful to the numerous clinicians and families that have supported XL-SMA disease gene discovery efforts through their cooperation throughout the years, as well as to the laboratories of Drs. Alfons Meindl and Eric Hoffman, who share in the XL-SMA disease gene discovery. This work was supported in the United States by funds from the Dr. John T. Macdonald Center for Medical Genetics at the University of Miami Miller School of Medicine, the University of Miami Miller School of Medicine, the national Muscular Dystrophy Association, the Families of SMA, and Paytons Pals; and in Europe, by the German Ministry for Research and Education grant and FAZIT-Stiftung, Frankfurt/Main, Germany. The authors would like to dedicate this review in memory of four human geneticists who were fundamental to the early days of this research project: Dr. Frank Greenberg, Dr. Ronald Haun, Dr. Emmanuel Shapira, and especially Dr. Victor McKusick, who thought every inherited disorder, common or rare, was worth recognition and further investigation.
Revision History
30 October 2008 (me) Review posted live
10 July 2008 (lbr) Original submission
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