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Disease characteristics. Autoimmune lymphoproliferative syndrome (ALPS), caused by defective lymphocyte homeostasis, is characterized by:
In ALPS-FAS (the most common and best-characterized type of ALPS, associated with germline mutations in FAS), non-malignant lymphoproliferation typically manifests in the first years of life, inexplicably waxes and wanes, and then decreases without treatment in the second decade of life; however, neither splenomegaly nor the overall expansion of lymphocyte subsets in peripheral blood decreases in many patients. Although autoimmunity is often not present at the time of diagnosis or at the time of the most extensive lymphoproliferation, autoantibodies can be detected before autoimmune disease manifests clinically. ALPS-FAS, caused by homozygous or compound heterozygous mutations in FAS, and characterized by severe lymphoproliferation before, at, or shortly after birth, usually results in death at an early age. ALPS-sFAS, resulting from somatic FAS mutations in selected cell populations, notably the alpha/beta double-negative T cells (α/β-DNT cells), appears to be similar to ALPS-FAS resulting from germline mutations in FAS, keeping in mind that patients with somatic mutations need to be better characterized.
Diagnosis/testing. The diagnosis of ALPS is based on clinical findings; laboratory abnormalities, including defective in vitro tumor necrosis factor receptor superfamily member 6 (Fas)-mediated apoptosis and T cells that express the alpha/beta T-cell receptor but lack both CD4 and CD8 (so-called α/β-DNT cells); and identification of mutations in genes relevant for the Fas pathway of apoptosis. Mutations in FAS (TNFRSF6) are associated with ALPS-FAS and ALPS-sFAS. Mutations in FASLG (previously known as FASL, TNFSF6) and CASP10 have been identified in a few individuals with ALPS.
Management. Treatment of manifestations: Lymphoproliferation can be suppressed with corticosteroids, cyclosporine, tacrolimus, sirolimus, and mycophenolate mofetil. Because lymphadenopathy and organomegaly invariably return once these agents are discontinued, one approach is to use immunosuppressive therapy only for severe complications of lymphoproliferation (e.g., airway obstruction) and/or autoimmune manifestations. Early experience with sirolimus suggests that it can reverse both proliferative and autoimmune features in ALPS; however, sirolimus is not without side-effects. Lymphoma is treated with conventional protocols. Bone marrow (hematopoietic stem cell) transplantation (BMT/HSCT), the only curative treatment for ALPS, has to date mostly been performed on patients with severe clinical phenotypes such as ALPS-FAS caused by biallelic mutations, or those with lymphoma, and those who developed complications from (often long-term) immunosuppressive therapy.
Surveillance: Clinical assessment, imaging and laboratory studies for manifestations of lymphoproliferation and autoimmunity, and specialized imaging studies to detect malignant transformation.
Agents/circumstances to avoid: Splenectomy typically does not lead to permanent remission of autoimmunity and may be associated with increased risk of infections. Aspirin and other nonsteroidal anti-inflammatory drugs (NSAIDs) should be used with caution in patients with immune thrombocytopenia (ITP) as they can interfere with platelet function.
Evaluation of relatives at risk: If the disease-causing mutation has been identified in a family member with ALPS, it is appropriate to perform molecular genetic testing on at-risk relatives to allow for early diagnosis and treatment.
Genetic counseling. ALPS-FAS is generally inherited in an autosomal dominant manner. Most individuals diagnosed with ALPS-FAS have a parent with a FAS mutation; the proportion of ALPS-FAS caused by either somatic mosaicism or de novo mutations is currently unknown. Each child of an individual with ALPS-FAS has a 50% chance of inheriting the FAS mutation. ALPS-FAS can also be inherited in an autosomal recessive manner, i.e., the consequence of homozygous or compound heterozygous (biallelic) FAS mutations. The parents of such an individual are likely to be heterozygotes, in which case each has one FAS mutant allele; these parents may have ALPS-related findings or may be clinically asymptomatic. Prenatal diagnosis for pregnancies at increased risk is possible if the disease-causing mutation(s) have been identified in an affected family member.
The diagnosis of autoimmune lymphoproliferative syndrome (ALPS) is based on a constellation of clinical findings, laboratory abnormalities, and identification of mutations in genes relevant for the tumor necrosis factor receptor superfamily member 6 (Fas) pathway of apoptosis.
Recently, a revised set of diagnostic criteria were proposed [Oliveira et al 2010]:
Required criteria
Primary accessory criteria
Secondary accessory criteria
ALPS should be considered in individuals with (combinations of) the following [Bleesing 2003, Rieux-Laucat et al 2003]: See also Clinical Manifestations of ALPS.
Although no specific laboratory abnormality alone is diagnostic of ALPS, the detection of the following facilitates the diagnosis [Bleesing 2003, Oliveira et al 2010]:
Laboratory findings in ALPS [Lim et al 1998, Carter et al 2000, Bleesing et al 2001a, Bleesing et al 2001b, Lopatin et al 2001, Bleesing et al 2002, Bleesing 2003, Bleesing 2005, Maric et al 2005, Magerus-Chatinet et al 2009, Caminha et al 2010, Oliveira et al 2010]:
Hematology
Immunology
Chemistry
Normal findings in ALPS
Note: (1) The abnormal and normal laboratory findings listed have been most reliably established for individuals with ALPS caused by either germline or somatic mutations in FAS. (2) Cell surface expression of Fas (CD95) can be normal, increased, or decreased and is in general not helpful in the diagnosis of ALPS. (3) When interpreting laboratory data of individuals with (suspected) ALPS, the influence of concurrent immunosuppressive agents at the time of testing needs to be considered.
Genes. Germline mutations in the three following genes are known to be associated with ALPS: FAS (TNFRSF6), FASLG (TNFSF6), and CASP10.
Additionally, FAS somatic mutations in selected cell populations, including α/β-DNT cells, produce a phenotype similar to that caused by FAS germline mutations.
FAS (TNFRSF6)
FASLG (FASL, TNFSF6)
CASP10
Evidence of further locus heterogeneity. Approximately 20%-25% of individuals with ALPS currently lack a genetic diagnosis. They are classified as having one of the following:
Note: (1) Depending on the criteria used to define ALPS (e.g., with regard to presence of α/β-DNT cells or demonstration of defective Fas-mediated apoptosis), defects in other genes or gene products inside or outside the Fas/FasL pathway may be associated with ALPS features; these include CASP8 encoding caspase-8 and the gene encoding N-RAS [Chun et al 2002, Oliveira et al 2007]. Three of these disorders have recently been classified as ALPS-related disorders: caspase-8 deficiency state (CEDS), Ras-associated autoimmune leukoproliferative disorder (RALD), and Dianzani autoimmune lymphoproliferative disease (DALD) [Oliveira et al 2010]. (2) No independently confirmed and published information has associated other Fas pathway-related genes with ALPS. (3) Thus far, somatic mutations in FAS only have been reported to cause ALPS; however, it is possible that somatic mutations in FASLG and CASP10 can also be causative.
Table 1. Summary of Molecular Genetic Testing Used in ALPS
| Gene Symbol | ALPS Type | Proportion of ALPS Attributed to Mutations in This Gene | Test Method | Mutation Type | Test Availability |
|---|---|---|---|---|---|
| FAS | ALPS-FAS | 65%-70% 1 | Sequence analysis | Sequence variants 2 | Clinical |
| ALPS-sFAS | ~15%-20% 3 | Research only | |||
| FASLG | ALPS-FASLG | <5% 4 | Clinical | ||
| CASP10 | ALPS-CASP10 | <5% 5 | Clinical |
1. Germline mutations [Rieux-Laucat et al 1995, Kasahara et al 1998, van der Burg et al 2000, Bleesing 2003, Rieux-Laucat et al 2003]
2. Examples of mutations detected by sequence analysis may include small intragenic deletions/insertions and missense, nonsense, and splice site mutations.
3. Somatic mutations in selected cell populations, including α/β-DNT cells [Holzelova et al 2004, Rössler et al 2005, Dowdell et al 2010]
4. To date, four affected individuals with germline mutations [Wu et al 1996, CIS 1999, Del-Rey et al 2006, Bi et al 2007]
5. To date, two affected individuals [Wang et al 1999, Zhu et al 2006]
Interpretation of test results. For issues to consider in interpretation of sequence analysis results, click here.
To confirm/establish the diagnosis in a proband. A recently proposed algorithm for diagnostic workup for patients with suspected ALPS based on the presence of required and accessory criteria is outlined in the revised diagnostic criteria for ALPS [Oliveira et al 2010]. The key components of this algorithm (keeping in mind that the presence of chronic non-malignant lymphoproliferation and α/β-DNT cells has already been established) are:
The proposed algorithm recommends the following:
Sequence analysis to determine presence of germline FAS mutation(s) in unsorted cells. If present, the diagnosis of ALPS is established and classified as ALPS-FAS.
In the absence of a germline FAS mutation(s): determine if biomarkers (as listed above) are elevated. If so, obtain sorted α/β-DNT cells to assess somatic mutation in FAS. If present, the diagnosis of ALPS is established and classified as ALPS-sFAS.
Note: absence of a positive family history is suggestive of ALPS-sFAS as well.
If neither a germline nor a somatic FAS mutation is identified, consider sequence analysis of CASP10 and FASLG.
Note: The presence of elevated biomarkers has not reliably been established in these ALPS genotypes.
If germline mutations in either CASP10 or FASLG have been identified, the diagnosis of ALPS is established and classified as ALPS-CASP10 or ALPS-FASLG, respectively.
If germline mutations in CASP10 or FASLG are not identified, perform Fas-mediated apoptosis assay (repeat if necessary, noting the influence of concomitant immunosuppressive therapy). If abnormal, the diagnosis of ALPS is established and classified as ALPS-U.
If Fas-mediated apoptosis assay is normal, consider somatic mutations in CASP10 or FASLG (using previously sorted DNTCs), or consider an alternative diagnosis.
Predictive testing for at-risk asymptomatic family members requires prior identification of the disease-causing mutation in the family.
Prenatal diagnosis and preimplantation genetic diagnosis (PGD) for at-risk pregnancies require prior identification of the disease-causing mutation in the family.
FAS. No phenotype other than ALPS is known to be associated with germline or somatic mutations in FAS.
FASLG, CASP10. Because only a few individuals with mutations in FASLG and CASP10 have been reported, it is currently unknown whether clinical phenotypes other than ALPS may be associated with mutations in these two genes; however, this possibility is considered unlikely.
Autoimmune lymphoproliferative syndrome (ALPS) can be considered a prototypic disorder of defective lymphocyte homeostasis [Sneller et al 1992, Fisher et al 1995, Rieux-Laucat et al 1995].
The manifestations are lymphadenopathy, hepatosplenomegaly with or without hypersplenism, and autoimmune disease, mostly directed toward blood cells. In addition, the risk of lymphoma is increased.
Lymphoproliferation of non-malignant lymphoid cells
Autoimmunity
Neoplasia (including benign tumors)
Other and/or infrequent findings
Much remains to be learned about the natural history and prognosis of ALPS. While non-malignant lymphoproliferative manifestations often regress or improve over time, autoimmunity appears to show no permanent remission with advancing age. Moreover, the risk for development of lymphoma likely is lifelong. Thus, in the absence of curative treatment, the overall prognosis for ALPS remains guarded, necessitating long-term clinical studies to better understand its natural history [Rieux-Laucat et al 1999, Bleesing 2003, Rieux-Laucat et al 2003].
ALPS-FAS. ALPS-FAS is the most common and best-characterized type of ALPS. The following are the main consequences of perturbed lymphocyte homeostasis in ALPS-FAS:
ALPS-FAS resulting from biallelic mutations
ALPS-sFAS. Somatic FAS mutations in selected cell populations (notably the α/β-DNT cells) have been identified in individuals with ALPS-sFAS. Individuals with somatic FAS mutations now constitute the second largest group of ALPS. Most of the clinical and laboratory features of ALPS-FAS are recapitulated in individuals with somatic FAS mutations, although no cases of lymphoma have yet been published.
The population of α/β-DNT cells is expanded; however, as noted initially [Holzelova et al 2004, Rössler et al 2005], Fas-mediated apoptosis in vitro is typically not defective, although such apoptosis has been noted in some recently published cases [Dowdell et al 2010].
Pathogenesis of ALPS. The phenotype of ALPS results from defective apoptosis of lymphocytes mediated through the Fas/Fas ligand (FasL) pathway. This pathway normally limits the size of the lymphocyte compartment by eliminating/removing autoreactive lymphocytes; therefore, defects in this pathway lead to expansion of antigen-specific lymphocyte populations. Although Fas also appears to play a role in suppression of malignant transformation of lymphocytes, it remains to be firmly established whether this involves the Fas/FasL pathway in a similar way. It should be noted that the pathogenesis of ALPS remains an ongoing topic of research.
Somatic FAS mutations are of particular interest in understanding the pathogenesis of ALPS, for example, with regard to the observed delay between lymphoproliferation and autoimmunity: the somatic mutation is mostly confined to the α/β-DNT cells and typically not found (at least not in large proportion) in other lymphocyte subsets such as B cells. Perhaps this observation will help to characterize the impact of the FAS mutation relative to other potential pathogenic factors.
ALPS-FAS. Although the death domain (DD) of ALPS — the intracellular domain of Fas that connects cell surface-expressed Fas to the intracellular (death) signal transduction pathway — is a mutational hotspot, genotypes resulting from mutations in any domain of Fas lead to the same clinical lymphoproliferative and autoimmune phenotype of ALPS. Lymphomas, in contrast, seem thus far to be associated only with mutations affecting the intracellular domains of Fas, though independent confirmation is required [Straus et al 2001].
Despite this similar clinical phenotype, in vitro Fas-mediated apoptosis is less defective in individuals with mutations affecting extracellular domains than in those with mutations affecting intracellular domains [Bleesing et al 2001b].
In the majority of affected individuals, heterozygous FAS mutations are associated with ALPS-FAS by the mechanism of dominant-negative interference; however, with certain mutations affecting extracellular domain, the mechanism is haploinsufficiency. In the latter case, the ALPS clinical phenotype may be less severe, linked to less defective in vitro apoptosis [Kuehn et al 2011]. (For further discussion see Molecular Genetic Pathogenesis.)
ALPS-FASLG and ALPS-CASP10. Because of their rarity, genotype-phenotype correlations are not established for FASLG and CASP10 mutations.
ALPS-FAS. A distinction needs to be made between the penetrance of the cellular phenotype (defective Fas-mediated apoptosis) and the penetrance of the clinical phenotype (i.e., ALPS).
Family studies to date show that penetrance for the defective Fas-mediated apoptosis cellular phenotype approximates 100% (i.e., every individual heterozygous for an inherited [germline] disease-causing mutation has defective apoptosis) whereas the penetrance for the clinical phenotype is reduced because a significant proportion of relatives heterozygous for the disease-causing mutation have no clinical findings of ALPS. In addition, other relatives display laboratory features of ALPS (e.g., expansion of lymphocyte subsets and/or autoantibodies) without clinical evidence of either lymphoproliferation or autoimmunity [Infante et al 1998, Jackson et al 1999, Bleesing et al 2001b].
The factors that determine the penetrance of clinical ALPS are not entirely understood. It appears that penetrance is determined by the location and type of mutation; however, further study and independent confirmation are needed [Rieux-Laucat et al 1999, Le Deist 2004]. The highest penetrance (70%-90%) for the clinical phenotype occurs with missense mutations affecting the intracellular domains, followed by mutations leading to truncation of the intracellular domains [Jackson et al 1999]. The penetrance for the clinical phenotype with extracellular mutations has been estimated at approximately 30%.
The reduced penetrance for ALPS in some families suggests that one or more additional pathogenic factors interact with defective Fas-mediated apoptosis. On the other hand, the high penetrance for the clinical phenotype in certain families associated with specific types of FAS mutations (e.g., missense mutations affecting the death domain) cast doubt on that assumption by suggesting that under certain conditions, a single defect in Fas-mediated apoptosis is sufficient to cause ALPS [Infante et al 1998, Jackson et al 1999, Le Deist 2004].
A recent observation may shed more light on the issue of penetrance, particularly as it relates to mutations affecting intracellular versus extracellular domains (as well as on pathogenesis and natural history of ALPS): in a small subset of affected individuals, clinical disease appeared to develop as a consequence of both an inherited heterozygous (germline) FAS mutation and a somatic genetic event in the second FAS allele [Magerus-Chatinet et al 2011]. Analysis of α/β-DNT cells revealed that the second genetic event involved either a somatic missense or nonsense mutation in the second FAS allele or loss of heterozygosity by telomeric uniparental disomy of chromosome 10.
Anticipation has not been documented in ALPS.
Table 2. Revised Classification of ALPS
The prevalence of ALPS is unknown. It is likely as rare as other primary immunodeficiency disorders that cause disease in a heterozygous state.
ALPS has a worldwide distribution and no predilection of race or ethnicity.
The main considerations in the differential diagnosis for autoimmune lymphoproliferative syndrome (ALPS) are other immunodeficiency disorders characterized or complicated by lymphoproliferation, autoimmune disease, and lymphoma. These include the following:
Note to clinicians: For a patient-specific ‘simultaneous consult’ related to this disorder, go to
, an interactive diagnostic decision support software tool that provides differential diagnoses based on patient findings (registration or institutional access required).
To determine the presence and extent of lymphoproliferation and/or autoimmunity in an individual diagnosed with autoimmune lymphoproliferative syndrome (ALPS), the following evaluations are recommended:
In the absence of curative treatment, current management is focused on the control and/or treatment of manifestations of lymphoproliferation and/or autoimmunity and the treatment of lymphoma [Rieux-Laucat et al 1999, Van Der Werff Ten Bosch et al 2001, van der Werff Ten Bosch et al 2002, Bleesing 2003, Rieux-Laucat et al 2003, Rao et al 2005].
Manifestations of lymphoproliferation typically can be suppressed with the use of immunosuppressive agents including corticosteroids, cyclosporine, sirolimus tacrolimus, and mycophenolate mofetil. The benefits of immunosuppression, however, are balanced by the side effects, as well as the need to monitor drug levels. Moreover, it has become clear that lymphadenopathy, as well as organomegaly, invariably return once immunosuppression is discontinued [Bleesing 2003]. Thus, one approach is to use immunosuppressive therapy only for severe complications of lymphoproliferation (e.g., airway obstruction) and/or autoimmune manifestations.
Early experience with sirolimus suggests that this agent may affect lymphoproliferation in a more sustained manner [Teachey et al 2009].
In severe cases, more potent – lymphodepleting – agents may be required to sufficiently control lymphoproliferative manifestations. Agents include cyclophosphamide, antithymocyte globulin (ATG) and select monoclonal antibodies such as alemtuzumab (Campath®).
Autoimmune manifestations typically respond to short courses of immunosuppressive agents.
Lymphoma is treated according to conventional protocols. The presence of defective Fas-mediated apoptosis does not appear to hinder the response to chemotherapeutic agents or radiation.
Bone marrow (hematopoietic stem cell) transplantation (BMT/HSCT) is currently the only curative treatment for ALPS. Because of the risks associated with BMT, it has so far been performed mostly in individuals with ALPS with severe clinical phenotypes, such as those with homozygous or compound heterozygous mutations in FAS. It is likely, however, that individuals with undiagnosed forms of ALPS, including ALPS-FAS, have been transplanted.
Successful (reported) BMT in several individuals indicates that defective Fas-mediated apoptosis does not pose a barrier to this treatment option [Benkerrou et al 1997, Sleight et al 1998, Dowdell et al 2010].
Vaccinations pre-splenectomy (with consideration of post-splenectomy boost vaccinations) and penicillin prophylaxis are strongly recommended for individuals who undergo splenectomy.
Clinical assessment, imaging, and laboratory studies outlined in Evaluations Following Initial Diagnosis can be used in surveillance for manifestations of lymphoproliferation and autoimmunity.
Specialized imaging studies such as combined CT and PET scanning in combination with clinical and laboratory surveillance may be helpful in detection of malignant transformation [Rao et al 2006].
Splenectomy to control autoimmune cytopenias is discouraged because it typically does not lead to permanent remission of autoimmunity and may be associated with an increased risk for infections [Author, unpublished observation, Price et al 2010].
The use of over-the-counter medications such as aspirin and other nonsteroidal anti-inflammatory drugs (NSAIDs) should be discussed with a physician as some of these medications can interfere with platelet function.
It is appropriate to perform molecular genetic testing on relatives at risk for ALPS-FAS, ALPS-FASLG or ALPS-CASP10 if the disease-causing mutation has been identified in the proband.
Relatives who have the family-specific mutation should:
See Genetic Counseling for issues related to testing of at-risk relatives for genetic counseling purposes.
Pregnancy Management
No evidence suggests that C-section reduces the risk of morbidity and mortality in newborns with ALPS, though the possible presence of autoimmune cytopenias such as immune thrombocytopenia in a newborn with ALPS-FAS could pose a risk of increased bleeding in the neonate.
Reduced-intensity transplants. The advent of less toxic BMT conditioning regimens (i.e., reduced-intensity transplants, or "mini-transplants") may make BMT a realistic treatment option for individuals with ALPS who are not considered candidates for conventional BMT because of the associated risks.
Search ClinicalTrials.gov for access to information on clinical studies for a wide range of diseases and conditions.
High-dose intravenous immune globulin (IVIG) does not appear to be as effective in inducing permanent or long-term remission in ALPS as it is in isolated immune thrombocytopenia (ITP).
Gene therapy. No studies regarding gene therapy to treat ALPS are ongoing; the highly regulated expression and activity of Fas pose substantial difficulties for gene therapy.
Genetic counseling is the process of providing individuals and families with information on the nature, inheritance, and implications of genetic disorders to help them make informed medical and personal decisions. The following section deals with genetic risk assessment and the use of family history and genetic testing to clarify genetic status for family members. This section is not meant to address all personal, cultural, or ethical issues that individuals may face or to substitute for consultation with a genetics professional. —ED.
ALPS-FAS, ALPS-FASLG, and ALPS-CASP10 are generally inherited in an autosomal dominant manner.
ALPS-FAS caused by biallelic mutations is inherited in an autosomal recessive manner.
Parents of a proband
Note: Although most individuals diagnosed with ALPS have a parent with a FAS mutation, the family history may appear to be negative because of reduced penetrance of the clinical symptoms of ALPS (as opposed to the nearly complete penetrance of defective in vitro apoptosis in individuals with a FAS mutation), failure to recognize the disorder in family members, early death of the parent before the onset of symptoms, or late onset of the disease in the affected parent. Therefore, molecular genetic testing is the most accurate means of determining the genetic status of at-risk individuals.
Sibs of a proband
Offspring of a proband. Each child of an individual with ALPS-FAS, ALPS-FASLG, or ALPS-CASP10 has a 50% chance of inheriting the FAS, FASLG, or CASP10 mutation. The risk of that child developing ALPS-related complications depends on the nature of the mutation as well as the presence of other, as-yet incompletely understood genetic or environmental factors.
Other family members of a proband. The risk to other family members depends on the genetic status of the proband's parents. If a parent has a FAS, FASLG, or CASP10 mutation, his or her family members may have inherited the same mutation and are potentially at some increased risk of developing ALPS-related complications.
Parents of a proband
Sibs of a proband
Offspring of a proband. Individuals with ALPS-FAS resulting from biallelic mutations are more likely to die at an early age and thus are not likely to reproduce.
Other family members of a proband. If a parent of the proband has a FAS mutation, his/her sibs are at a 50% risk of having the mutation.
See Management, Evaluation of Relatives at Risk for information on evaluating at-risk relatives for the purpose of early diagnosis and treatment.
Considerations in families with an apparent de novo mutation. When neither parent of a proband with an autosomal dominant condition has the disease-causing mutation or clinical evidence of the disorder, it is likely that the proband has a de novo mutation. However, possible non-medical explanations including alternate paternity or maternity (e.g., with assisted reproduction) or undisclosed adoption could also be explored.
Testing of at-risk asymptomatic family members for FAS, FASLG, or CASP10 mutations is possible once the disease-causing mutation(s) are identified in the proband. Although the factors that determine the penetrance of clinical ALPS are not entirely understood, penetrance appears to be determined by the location and type of mutation. Results of testing of at-risk asymptomatic family members may be helpful in predicting phenotype.
Molecular genetic testing of asymptomatic individuals should in general be undertaken following thorough genetic counseling and assessment of family-specific risks.
Family planning
DNA banking is the storage of DNA (typically extracted from white blood cells) for possible future use. Because it is likely that testing methodology and our understanding of genes, mutations, and diseases will improve in the future, consideration should be given to banking DNA of affected individuals.
If the disease-causing mutation(s) have been identified in the family, prenatal diagnosis for pregnancies at increased risk is possible by analysis of DNA extracted from fetal cells obtained by amniocentesis (usually performed at ~15-18 weeks’ gestation) or chorionic villus sampling (usually performed at ~10-12 weeks’ gestation).
Note: Gestational age is expressed as menstrual weeks calculated either from the first day of the last normal menstrual period or by ultrasound measurements.
Preimplantation genetic diagnosis (PGD) may be an option for some families in which the disease-causing mutation(s) have been identified.
GeneReviews staff has selected the following disease-specific and/or umbrella support organizations and/or registries for the benefit of individuals with this disorder and their families. GeneReviews is not responsible for the information provided by other organizations. For information on selection criteria, click here.
Information in the Molecular Genetics and OMIM tables may differ from that elsewhere in the GeneReview: tables may contain more recent information. —ED.
Table A. Autoimmune Lymphoproliferative Syndrome: Genes and Databases
Table B. OMIM Entries for Autoimmune Lymphoproliferative Syndrome (View All in OMIM)
| 134637 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY, MEMBER 6; TNFRSF6 |
| 134638 | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY, MEMBER 6; TNFSF6 |
| 601762 | CASPASE 10, APOPTOSIS-RELATED CYSTEINE PROTEASE; CASP10 |
| 601859 | AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME; ALPS |
| 603909 | AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE IIA; ALPS2A |
Autoimmune lymphoproliferative syndrome (ALPS) can be considered a prototypic disorder of defective lymphocyte homeostasis [Sneller et al 1992, Fisher et al 1995, Rieux-Laucat et al 1995]. Although it appears that the full clinical spectrum of ALPS may depend on the interplay of several pathogenic factors, defective activation-induced cell death (also known as apoptosis or cellular suicide) through the Fas/FasL pathway is central in the etiology of ALPS [Lenardo et al 1999]. The two existing mouse models of lymphoproliferative disease show features similar (though not identical) to features of ALPS [Watanabe-Fukunaga et al 1992, Takahashi et al 1994].
As in the mouse models, the genetic background may determine penetrance of the clinical manifestations of ALPS, as well as the age of onset and/or severity of these manifestations. The genetic background may concern detrimental (loss-of-function) mutations affecting other tumor necrosis factor receptor superfamily member 6 (Fas) pathway components, as demonstrated by individuals with tumor necrosis factor ligand superfamily member 6 (FasL) and caspase-10 defects. Alternatively, genes relevant to Fas-independent apoptosis pathways may be affected. It should be noted that the distinction between Fas-mediated apoptosis pathways (i.e., the extrinsic apoptosis pathway) and Fas-independent apoptosis pathways (i.e., the intrinsic apoptosis pathway) is largely artificial, as connections between the two pathways exist and both pathways can be engaged in vivo, depending on multiple variables that include (among others) levels of antigens and levels of growth factors [Snow et al 2008]. Case in point: a patient has been identified with a partial ALPS phenotype, associated with a gain-in-function mutation in the gene encoding N-RAS [Oliveira et al 2007].
Finally, the genetic background may operate at the level of genes that encode regulators of other aspects of lymphocyte function and survival. The presence of clinical manifestations of ALPS at birth makes environmental influences less likely; the occurrence of murine ALPS in Fas-mutant mice kept in a germ-free environment is consistent with this assumption.
The discovery of individuals with ALPS with somatic mutations in FAS may offer new insights as the presence of mutations in some, but not all, lymphocyte subsets could allow dissection of the molecular mechanisms of ALPS in a manner that cannot be achieved in individuals with germline mutations in FAS.
Normal allelic variants. FAS comprises nine exons. Exons 1 and 2 encode a signal sequence that, upon trafficking of the Fas protein to the cell surface, is cleaved off. Exons 3, 4 and 5 encode three extracellular cysteine-rich domains (CRD). Exon 6 encodes the transmembrane domain (TM). The intracellular domains of Fas are encoded by exons 7-9, with exon 9 representing the death domain (DD) that interacts with the intracellular, apoptosis-inducing signal transduction pathway [Jackson et al 1999].
Genomic DNA of FAS spans approximately 25 kb. To date, at least eight alternatively spliced transcript variants encoding seven distinct normal allele variants have been observed. These have been documented by biochemical and functional testing in vivo and are highly unlikely to have pathologic effects on FAS expression.
Pathologic allelic variants. To date, approximately 70 pathologic variants have been identified. Mutations have been found throughout the entire coding region and exon/intron boundaries. These allele variants would lead to the absence of functional proteins or result in truncated proteins.
Most of the (reported) FAS mutations affect the intracellular domains of Fas, with approximately 60% of those located in the death domain. Mutations include missense mutations, nonsense mutations, splicing defects, small deletions/insertions, gross deletions, and complex deletion/duplications.
Normal gene product. FAS encodes a 16-amino acid signal sequence, followed by a mature protein of 319 amino acids with a single transmembrane domain and a molecular mass of approximately 36 kd.
The protein encoded by FAS is a member of the TNF-receptor superfamily and contains a death domain; it has been shown to play a central role in the physiologic regulation of programmed cell death. The interaction of Fas with its ligand allows the formation of a death-inducing signaling complex that includes Fas-associated death domain protein (FADD), caspase-8, and caspase-10. The autoproteolytic processing of the inductor caspases in the complex triggers a downstream effector caspase cascade, leading to apoptosis. Fas has also been shown to activate NF-kappaβ, MAPK3/ERK1, and MAPK8/JNK, leading to the transduction of proliferating signals in normal diploid fibroblast and T cells.
Abnormal gene product. The fact that heterozygous mutations lead to defective Fas-mediated apoptosis can be explained by dominant-negative interference by the abnormal Fas protein in many cases of ALPS-FAS. Because Fas and FasL form homotrimers, the contribution of the mutant FAS allele versus the normal FAS allele to these trimers results in a normal Fas trimer (consisting of three normal proteins) in only one out of eight, and an abnormal Fas trimer (in which at least one of the proteins is mutated) in seven out of eight possible configurations, assuming equal amounts of mutant and wild type Fas protein [Fisher et al 1995, Jackson et al 1999]. Dominant-negative interference by abnormal Fas chains has been demonstrated for mutations affecting the death domain as well as for other intracellular mutations [Jackson et al 1999, Martin et al 1999].
Extracellular heterozygous mutations affecting the FasL-binding domain (CRD2 and CRD3) are also associated with dominant-negative interference because Fas proteins self-associate into trimers prior to FasL interaction. The result, as with intracellular mutations, is the assembly of faulty Fas trimers that dominantly interfere with Fas-mediated apoptosis in seven out of eight configurations [Siegel et al 2000]. For other extracellular heterozygous mutations, including mutations that affect the domain of the protein that regulates self-association into trimers, defective apoptosis can be explained by interference of truncated and/or soluble fragments of mutant Fas, or by haploinsufficiency, in which the total amount of Fas generated is below a threshold needed for physiologic induction of apoptosis [Roesler et al 2005, Kuehn et al 2011].
In individuals with homozygous or compound heterozygous mutations, defective Fas-mediated apoptosis can be explained by loss of function [van der Burg et al 2000]. In contrast to those with heterozygous mutations, these individuals display absent or reduced surface expression of Fas on lymphocytes.
Normal allelic variants. FASLG (FASL) spans approximately 8 kb and comprises four exons. No normal allelic variants have been reported to date.
Pathologic allelic variants. See Table 3. To date, only three pathologic alleles have been reported. Wu et al [1996] described p.Met158_Glu185del resulting in a 28-amino acid in-frame deletion within exon 4 of FASLG in a person with lymphadenopathy. The second mutation, c.-844T>C, is in the promoter region of FASLG [Zhang et al 2005]. The third mutation, a homozygous p.Ala247Glu, was found in an individual with ALPS who demonstrated both defective FasL-mediated apoptosis and defective Fas-dependent cytotoxic function, while the fourth case concerns an individual with ALPS with a heterozygous mutation that leads to a substitution of p.Arg156Gly [Del-Rey et al 2006, Bi et al 2007].
Table 3. Selected FASLG Pathologic Allelic Variants
| DNA Nucleotide Change (Alias 1) | Protein Amino Acid Change (Alias 1) | Reference Sequences |
|---|---|---|
| c.-844T>C | None | NM_000639 NP_000630 |
| c.472_555del | p.Met158_Glu185del (84-bp deletion) | |
| c.740C>A | p.Ala247Glu | |
| c. 466A>G (530A>G) | p.Arg156Gly |
See Quick Reference for an explanation of nomenclature. GeneReviews follows the standard naming conventions of the Human Genome Variation Society (www
1. Variant designation that does not conform to current naming conventions
Normal gene product. The FASLG cDNA codes a protein of 281 amino acids. Fas ligand (FasL) is a type II transmembrane protein that belongs to the tumor necrosis factor family. It is expressed in activated splenocytes and thymocytes, consistent with its involvement in T-cell mediated cytotoxicity and in several non-lymphoid tissues (e.g., testis, liver, lung, ovary, heart), where its function is unclear.
Abnormal gene product. A study of peripheral blood mononuclear cells from the individual with the p.Met158_Glu185del mutation revealed decreased FasL activity, decreased activation-induced cell death, and increased T-cell proliferation after activation [Wu et al 1996]. The individual with the homozygous missense mutation (p.Ala247Glu) showed decreased Fas-mediated cell death and Fas-dependent cytotoxicity [Del-Rey et al 2006]. Compared to controls, the c.-844T>C mutation resulted in increased expression of FasL in many types of human cancers including lung cancer [Zhang et al 2005]. The heterozygous p.Arg156Gly mutation affects the extracellular Fas-binding region of FASL. The mutation produces a dominant interfering FasL protein that binds to wild-type FasL, preventing Fas-mediated apoptosis [Bi et al 2007].
Normal allelic variants. See Table 4. CASP10 comprises 11 exons and spans approximately 48 kb [Hadano et al 2001]. There are two isoforms of CASP10 transcripts. The CASP10L isoform encodes an insertion of 43 amino acids at the end of the prodomain, but its C terminus is the same as the short CASP10 isoform. The two isoforms are expressed equally. In addition, one common polymorphic variant of CASP10 (p.Thr446Cys) was observed in 5% of normal controls and had no effect on apoptotic function of caspase-10 [Wang et al 1999].
Pathologic allelic variants. See Table 4. To date, seven CASP10 mutations have been reported in eight individuals [Wang et al 1999, Park et al 2002, Shin et al 2002]. Two missense mutations, p.Leu285Phe and p.Ile406Leu, were identified in one and two kindreds, respectively, with ALPS-CASP10 characterized by abnormal lymphocyte and dendritic cell homeostasis and immune regulatory defects [Wang et al 1999, Zhu et al 2006]. The other five somatic mutations in CASP10 were suspected to be responsible for development of non-Hodgkin lymphoma (NHL) and gastric cancers [Park et al 2002, Shin et al 2002].
Note: The previously reported homozygous p.Val367Ile mutation [Wang et al 1999] has subsequently been deemed not be associated with ALPS-CASP10 [Zhu et al 2006].
Table 4. Selected CASP10 Allelic Variants
| Class of Variant Allele | DNA Nucleotide Change (Alias 1) | Protein Amino Acid Change (Alias 1) | Reference Sequences |
|---|---|---|---|
| Normal | c.1337A>G (1208A>G) | p.Tyr446Cys | NM_032977 NP_116759 |
| Pathologic | c.853C>T (c.724C>T) | p.Leu285Phe (p.Leu242Phe) | |
| c.1216A>C (c.1087A>C) | p.Ile406Leu (p.Ile363Leu) | ||
| c.1228G>A (c.1099G>A) | p. Val410Ile (p. Val367Ile) |
See Quick Reference for an explanation of nomenclature. GeneReviews follows the standard naming conventions of the Human Genome Variation Society (www
1. Variant designation that does not conform to current naming conventions
Normal gene product. The physiologic function of caspase-10 is poorly understood. Gene transfection assays verified its function as a death-inducing caspase [Chaudhary et al 1997, Pan et al 1997, Schneider et al 1997, Vincenz & Dixit 1997]. Moreover, Wang et al [2001] showed that caspase-10 can function independently of caspase-8 in initiating Fas and tumor necrosis factor-related apoptosis.
Abnormal gene product. The p.Leu285Phe and p.Val410Ile mutations result in decreased caspase activity and dominantly interfere with death receptor-induced apoptosis, particularly that stimulated by FasL and TRAIL. Wang et al [1999] and Shin et al [2002] expressed some CASP10 mutants in 293 cells and found that apoptosis was suppressed, possibly contributing to the pathogenesis of some human non-Hodgkin lymphomas.
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